| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7329 |
|---|
| Symbol | |
|---|
| ID | 5675630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8965122 |
|---|
| End bp | 8965448 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641246166 |
|---|
| Product | thioredoxin |
|---|
| Protein accession | YP_001511554 |
|---|
| Protein GI | 158319046 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.231985 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.658106 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGCT CCACCCCCGC GGTGACGGAC GGCACGTTCG CCGCCGAGGT GCTCAAGAGC
GACAAGCCCG TACTCGTCGA CTTCTGGGCC GAGTGGTGCG GCCCGTGCAA GATGGTCGCG
CCGGTACTGG AGGAGATCGC CAAGGAGCAC GGCGAGAAGC TCCGGATCGT CAAGCTCAAC
ATCGACGAGA ACCCGGAGGT CGCGCGGCAG TACCAGATCA TGTCGATCCC GACGATGGCC
GTCTTCGTCA ACGGCGAGAT CGACAAGAGC ATCGTCGGCG CCAAGCCGAA GGCCGCGCTG
CTGCGCGACC TGTCGTCCTA CATCTGA
|
|---|
| Protein sequence | MAGSTPAVTD GTFAAEVLKS DKPVLVDFWA EWCGPCKMVA PVLEEIAKEH GEKLRIVKLN
IDENPEVARQ YQIMSIPTMA VFVNGEIDKS IVGAKPKAAL LRDLSSYI
|
|---|
| |