Gene Franean1_7325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7325 
Symbol 
ID5675626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8959020 
End bp8961212 
Gene Length2193 bp 
Protein Length730 aa 
Translation table11 
GC content73% 
IMG OID641246162 
Productserine/threonine protein kinase 
Protein accessionYP_001511550 
Protein GI158319042 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0416051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGGGC CGGACTCGTA CACTGAACAC GCTGTGCGCG GGCCCCGCCC AACGTCGCCG 
GTGAACCAGG CGCAGCACCC AGCTCGTCGC GTTGGTCACA CGATGCGTTC CGATGCGACG
GAGGGTGTCC GGGATGTTCG TTCGCAGTGG CGGAACGCTG GGCGGATCCC CTGCCCGGGT
GAGGTGGGGC AACCCGCCGT CGGGTCGGCC GGCGGGTATG CGGACGACGG AGGCGCTGTG
GTCGACGGAA GCAACCGACC GCAGGGCGCG GACGTCGATA ACGACGTGAC CACCGACTCG
CCGGGCGAGC GCCCGGCCAG CACGGCCGTG CTGGCCGAAT CCGTTCTCGA CCGCCGCTAC
CGTCTCCTGG CGCCGCTGAA CACCCGCGGC CCGGTGACCC TGTGGCGGGG TGACGACAAC
ACGCTCGCCC GGCCGGTGGC CGTCCGGATC GTCGAGCACG TCGACCCCGG CACCGACCCC
GACGCCGCGG CGGAGATCGA TCCGGCTGTC CGGGAGGACG CGGCCCGCGC CCTGCTGAAG
GCGGCGATCA ACTCCGGGCG GCTGGTACAC CCGGGCGCCG CGTCGACCTA CGACGCCACG
ACCACGACCA CCGGCACGGC CCGTGTCTCC TATGTCGTCT CGGAGTGGGT GGAGGGGCGC
ACCCTGCGCC AGCTCGCCAC CAACGGGCCA CTACGCCCCG AACAGGCCGG GGCCATCGTC
CTGGCGGCGG CGCGGGTCCT CTCCGCCGCG CACGACCGCG GCATCCACCA CGGCGGGCTC
AACCCCGGCG ATGTGATCGT CTCCGGCCAC GGCACCGTGA AGGTCGTCGA CCTGGAGATC
GGCGGCGTCC TCGCGGGGCT GGACGGCGCG GCGACGGGCG CGGAGCCCAC CATCGGCTCC
GACCCGGAGA AGGACGACGC ACCCCCCTCG GCCGAGCTGG CGGACGTCCG GGCCCTCGGC
GGGCTGCTGT ACGCCGGGCT GACCGGCACC TGGCCGCTGC TCGGCGAGCA CGCGCTGCCG
GCCGCCCCGA CGAGCGACGG CCGGCTGCGG ACCCCCCGGC AGATCAACTC GGCCGTCCCG
CGCGACCTCG ACGCGATCAC CCTGGCGACC CTCGGCGACG AGCGGGCCGG CGCGCCGATC
ACGACCGCCG CCGAGCTGGT CTCGGAGCTC GAGGCGGTCA GCCCGGTCGA CCAGGTCCTC
GACACCGGCC TGATGAGCCT CGGTGACGAC GGCCCCGCGA GCACCGAGGC GATGTCGGTC
GACGGCTACA ACCCGGCCAC GGACGACTAC CCCGCCCCCT CCGACTACCC GGGGCAGGGC
TACGCCGGCG GGAGCAGCTC CGGCGGCAAC GGCTACGGCG GCCGCGACGA CTACGACCGC
CGCGGCTACG ACCAGACCTC CTACCTGGGC CGCGACGGCT ACGACCAGAC CTCCTACAAC
GAGCGCGGCT ACGGCGGCCG GAGCGGTTAC GACGACCGCG ACCGGGGCGG CTACCCGTCG
CAGCGCGAGG CGCCCGAGCA GCGCCGGTAC GACGACGACC GTTACCCGCC CGCCGGCGGG
CACCGCCAGG GCGGTGGGTC GGGCGGGGCT GGCGGCGGCG CCGTCCGCCG GGTCCTGCCC
TGGGTGGCCC TGCTGGTGGT GATCGCCCTC GTCGCCGTCG TGGCGGTGAT CGCCTTTCGC
CCGAAGGACG ATGGTGGCGG CAACCCGGGC GGGGATACCG GCCCTTCCTC CATGGCCGTG
GTGCCCTCCG GTAACCGGAT TCCTTTCGGC TCGGTCACCT CGTTCGACCC GCCCCCGGCC
GGTGACGGGG CGGAGAAGCC GGACCTCGTA CCGCTCGCCA CCGATGGGAA CCCGGCCACC
CAGTGGGCGA CGGACGGATA CCACAGCCCT CAGTTCGGCG GGCTGAAGAA GGGCGTGGGG
CTGCGCTTCG ACTTCAACCA GCCGATAACC CCGAGCGAGG TTGTCGTCAC CGTCGGGAGG
GAAGGCCCGA TCACCTTTGA GCTGCGGGCC GGCGATTCGC TCTCGGACAA CATCAACGAC
TACGCGGTCA TCGGTGTACC GCAGCAGAAC AAGACCGGCG AGGTCCGCAT CAGCATGCCG
TCCGAGCAGC CGACTCATCG GTACTGGGTG CTGTGGCTGA CCGAGCTTCC GTCCAACAAG
GGATCGATCG CGGAGATCGA GTTCCGGGGC TGA
 
Protein sequence
MPGPDSYTEH AVRGPRPTSP VNQAQHPARR VGHTMRSDAT EGVRDVRSQW RNAGRIPCPG 
EVGQPAVGSA GGYADDGGAV VDGSNRPQGA DVDNDVTTDS PGERPASTAV LAESVLDRRY
RLLAPLNTRG PVTLWRGDDN TLARPVAVRI VEHVDPGTDP DAAAEIDPAV REDAARALLK
AAINSGRLVH PGAASTYDAT TTTTGTARVS YVVSEWVEGR TLRQLATNGP LRPEQAGAIV
LAAARVLSAA HDRGIHHGGL NPGDVIVSGH GTVKVVDLEI GGVLAGLDGA ATGAEPTIGS
DPEKDDAPPS AELADVRALG GLLYAGLTGT WPLLGEHALP AAPTSDGRLR TPRQINSAVP
RDLDAITLAT LGDERAGAPI TTAAELVSEL EAVSPVDQVL DTGLMSLGDD GPASTEAMSV
DGYNPATDDY PAPSDYPGQG YAGGSSSGGN GYGGRDDYDR RGYDQTSYLG RDGYDQTSYN
ERGYGGRSGY DDRDRGGYPS QREAPEQRRY DDDRYPPAGG HRQGGGSGGA GGGAVRRVLP
WVALLVVIAL VAVVAVIAFR PKDDGGGNPG GDTGPSSMAV VPSGNRIPFG SVTSFDPPPA
GDGAEKPDLV PLATDGNPAT QWATDGYHSP QFGGLKKGVG LRFDFNQPIT PSEVVVTVGR
EGPITFELRA GDSLSDNIND YAVIGVPQQN KTGEVRISMP SEQPTHRYWV LWLTELPSNK
GSIAEIEFRG