Gene Franean1_7318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7318 
Symbol 
ID5675619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8945689 
End bp8946762 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content68% 
IMG OID641246155 
Productmyo-inositol-1-phosphate synthase 
Protein accessionYP_001511543 
Protein GI158319035 
COG category[I] Lipid transport and metabolism 
COG ID[COG1260] Myo-inositol-1-phosphate synthase 
TIGRFAM ID[TIGR03450] inositol 1-phosphate synthase, Actinobacterial type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.292754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCGG TACGTGTCGC CATCGTGGGC GTGGGCAACT GCGCCGCATC TCTCGTCCAA 
GGGGTCGAGT ACTACCGCGA CGCCGACCCC GCGGCCCAGG TCCCAGGCCT GATGCACGTC
ACGCTCGGTG ACTACCATGT CTCCGACCTG ACCTTCGTCG CGGCGTTCGA CGTGGACGCG
AAGAAGGTGG GCCGTGACCT CTCCGAGGCC ATCGTGGCCA GCGAGAACAA CACCATCAAG
ATCGCGGACG TCCCGCCGCT GGGCGTGACC GTGGCCCGCG GGCACACCCT CGACGGCCTC
GGCCGCTACT ACCGCGAGAC GATCGACGAG TCGGACGAGA CCCCGGTCGA CGTCGTCGCC
ACCCTGCGTG AGACCCGCGC CGACGTGCTC GTCTGCTACC TGCCGGTCGG GTCCGAGGAC
GCCGCGAAGT TCTACGCCCA GTGCGCCATC GACGCGGGCG TCGGGTTCAT CAACTGCCTG
CCGGTCTTCA TCGCCGGTGT CCCCGAGTGG GCCGAGAAGT TCCGCGCGGC GGGCGTGCCG
ATCGTCGGCG ACGACATCAA GTCGCAGGTC GGCGCCACCA TCACCCACCG GGTCATGGCG
AAGCTGTTCG AGGACCGTGG CGTCGTCCTC GACCGCACGA TGCAGCTCAA CGTCGGCGGC
AACATGGACT TCAAGAACAT GCTCGAGCGG GATCGGCTGG AGTCGAAGAA GATCTCCAAG
ACCCAGGCCG TCACCTCCCA GGTCTCCCAC GACCTGGGCA AGGACAACGT GCACATCGGC
CCGTCCGACT ACGTCGCCTG GCTCGACGAC CGCAAGTGGG CCTACGTCCG GCTTGAGGGC
CGCGCGTTCG GTGACGTCCC GCTGAACCTG GAGTACAAGC TCGAGGTCTG GGACTCCCCC
AACAGCGCCG GTGTGGTCAT CGACGCCGTC CGCTGCGCGA AGATCGCGCT GGACCGCGGC
GTCGGCGGGC CGATCCTCTC CGCGTCGTCG TACTTCATGA AGTCGCCGCC GGAGCAGTAC
CGCGACAACG AGGCCCGCGA CAAGGTCGAG GCGTTCATCC GCGACGAGGG CTGA
 
Protein sequence
MGSVRVAIVG VGNCAASLVQ GVEYYRDADP AAQVPGLMHV TLGDYHVSDL TFVAAFDVDA 
KKVGRDLSEA IVASENNTIK IADVPPLGVT VARGHTLDGL GRYYRETIDE SDETPVDVVA
TLRETRADVL VCYLPVGSED AAKFYAQCAI DAGVGFINCL PVFIAGVPEW AEKFRAAGVP
IVGDDIKSQV GATITHRVMA KLFEDRGVVL DRTMQLNVGG NMDFKNMLER DRLESKKISK
TQAVTSQVSH DLGKDNVHIG PSDYVAWLDD RKWAYVRLEG RAFGDVPLNL EYKLEVWDSP
NSAGVVIDAV RCAKIALDRG VGGPILSASS YFMKSPPEQY RDNEARDKVE AFIRDEG