| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7312 |
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| Symbol | rpsF |
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| ID | 5675613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8935824 |
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| End bp | 8936150 |
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| Gene Length | 327 bp |
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| Protein Length | 108 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641246149 |
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| Product | 30S ribosomal protein S6 |
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| Protein accession | YP_001511537 |
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| Protein GI | 158319029 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.032442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCCACGCC ACTATGAACT GATGGTGATC CTCGATTCCG AGCTCGAGGA GCGCACGGTC
GCACCCTCGC TCGACCAGTA CCTCAACGTC GTCCGTCAGG GCGGCGGCGT GGTCGAGAAG
GTCGACGTGT GGGGCCGCCG CCGGCTCTCC TACGAGATCG CCAAGAGCTT CGAGGGCATC
TACGCCGTCA TCGACCTGCA CACGGAGCCG GCCGTCGTCG CCGAGCTGGA CCGCCAGCTC
GTCCTCAACG AGTCCGTGAT CCGCACCAAG GTGATCCGGC TGCCCGAGCC CAAGGCTCCG
CGGCCGAACC GCCGGGCGGC GGCGTGA
|
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| Protein sequence | MPRHYELMVI LDSELEERTV APSLDQYLNV VRQGGGVVEK VDVWGRRRLS YEIAKSFEGI
YAVIDLHTEP AVVAELDRQL VLNESVIRTK VIRLPEPKAP RPNRRAAA
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