| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7305 |
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| Symbol | |
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| ID | 5675606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8927975 |
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| End bp | 8929828 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641246142 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001511530 |
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| Protein GI | 158319022 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.150096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCTT TGCGTTCCCG CACCACCACC CACGGTCGAA ACATGGCCGG TGCCCGCGCC
CTGTGGCGGG CGACCGGCAT GACCGACGAC GACTTCGGCA AGCCGATCGT CGCGATCGCG
AACAGCTTCA CGCAGTTCGT TCCCGGCCAT GTCCACCTGC GGGACCTCGG GAAGATCGTC
GCGGACGCGG TGGCCGGGTC GGGCGGGGTG GCCAAGGAGT TCAACACGAT CGCCGTCGAC
GACGGCATCG CGATGGGCCA CGGCGGCATG CTGTACTCCC TGCCATCCCG GGAGATCATC
GCGGACAGCG TCGAGTACAT GGTCAACGCC CACTGCGCCG ATGCGCTGGT CTGCATCTCG
AACTGTGACA AGATCACCCC GGGGATGCTG ATCGCCGCGC TGCGGCTCAA CATCCCGACC
GTCTTCGTCT CCGGCGGCGC GATGGAATCC GGTCACGCCG TCGTCACCGG CGGGATCGTG
CGGTCGCGGC TCGACCTGAT CGACGCGATG ACCGCGGCCG TCAACCCCGA CGTCAGCGAC
GCCGACCTGG ACACCATCGA GCGGTCCGCC TGCCCCACCT GCGGCTCCTG CTCCGGCATG
TTCACGGCCA ACTCGATGAA CTGCCTGACC GAGGCGCTCG GCCTGGCGCT GCCGGGCAAC
GGCTCGACGC TGGCCACCGC GGCGGCCCGG CGCGGCCTGT TCGTCGAGGC CGGTCGCCTG
GTCGTCGACC TGGCCCGCCG GTACTACGAG AAGGACGACG AGGCCGTCCT ACCCCGCTCG
ATCGCGAGCG CGGCGGCGTT CCGCAACGCG TTCGCGGTGG ACGTCGCCAT GGGCGGTTCG
ACGAACACCG TCCTGCACCT GCTCGCCGCC GCCGTCGAGG CCGGGGTCGA GGTGACCCTC
GACGACATCG ACCAGGTCTC CCGCTCGGTG GCCTGCCTGT GCAAGGTGGC GCCCAGCTCG
ACCGACTACT ACATGGAAGA CGTCCACCGG GCCGGCGGGA TCCCGGCGAT CCTCGGTGAG
CTCGACCGCG GCGGTCTGGT GGACCCGAAC GTGCACAGCG TGCACGCGGC GAGCCTGCGC
GAGTTCCTCG ACCGCTGGGA CGTGCGCGGG GCGGACCCGT CCCCGGACGC GATCGAGCTG
TTCCACGCCG CGCCCGGCGG CGTGCGCACC GTCGAACCGT TCGGCTCGAC GAACCGCTGG
GACACCCTCG ACACCGACGC GAAGAACGGC TGCATCCGCT CGGTCGAGCA CGCCTACTCG
GCCGACGGCG GCCTGGCCGT GCTGCGCGGC AACCTGGCCC CCGACGGCGC CGTGGTGAAG
ACGGCCGGCG TCGACGAGAG CCAGTGGACG TTCCGCGGGC CCGCGCTGGT CGTCGAGAGC
CAGGAGGCCG CGGTCGACGC GATCCTGAAC AAGGTCGTCA AGGCGGGCGA CGTGATCATC
GTCCGGTATG AGGGCCCCCG CGGTGGGCCC GGCATGCAGG AGATGCTCTA CCCGACGGCG
TTCCTCAAGG GCCGCGGCCT CGGGCCGAAG TGCGCGCTGA TCACCGATGG CCGCTTCTCC
GGTGGCAGCT CGGGCCTGTC GATCGGCCAC GTCTCCCCGG AGGCGGCGCA CGGTGGCCCG
ATCGCGCTCG TCCGGGACGG TGATCTCGTC GAGATCGACA TCCCGCGGCG GCGGATCGAC
CTGCTGGTGC CGGACGCCGA GCTCGCCGCG CGGCGGGCCG AGATCGAGGC GAACGGCGGC
TACCACCCGG CGAACAGGGA GCGTGTCGTG TCGGCCGCGC TGCGCGCCTA CGCGGCCATG
GCGACGTCCG CCTCGACCGG TGCCGCCCGT GACGTCCGGC TCATCACGGG ATGA
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| Protein sequence | MPALRSRTTT HGRNMAGARA LWRATGMTDD DFGKPIVAIA NSFTQFVPGH VHLRDLGKIV
ADAVAGSGGV AKEFNTIAVD DGIAMGHGGM LYSLPSREII ADSVEYMVNA HCADALVCIS
NCDKITPGML IAALRLNIPT VFVSGGAMES GHAVVTGGIV RSRLDLIDAM TAAVNPDVSD
ADLDTIERSA CPTCGSCSGM FTANSMNCLT EALGLALPGN GSTLATAAAR RGLFVEAGRL
VVDLARRYYE KDDEAVLPRS IASAAAFRNA FAVDVAMGGS TNTVLHLLAA AVEAGVEVTL
DDIDQVSRSV ACLCKVAPSS TDYYMEDVHR AGGIPAILGE LDRGGLVDPN VHSVHAASLR
EFLDRWDVRG ADPSPDAIEL FHAAPGGVRT VEPFGSTNRW DTLDTDAKNG CIRSVEHAYS
ADGGLAVLRG NLAPDGAVVK TAGVDESQWT FRGPALVVES QEAAVDAILN KVVKAGDVII
VRYEGPRGGP GMQEMLYPTA FLKGRGLGPK CALITDGRFS GGSSGLSIGH VSPEAAHGGP
IALVRDGDLV EIDIPRRRID LLVPDAELAA RRAEIEANGG YHPANRERVV SAALRAYAAM
ATSASTGAAR DVRLITG
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