Gene Franean1_7275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7275 
Symbol 
ID5675576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8883382 
End bp8883837 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content74% 
IMG OID641246112 
ProductMarR family transcriptional regulator 
Protein accessionYP_001511500 
Protein GI158318992 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.430156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0802572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCAC CCGACACCGG CGACGAGGTC GTCGACCTCA TCCTCGCCCT CGGCCATCAG 
GTCAGGCGCG GGGTGAACGA GTCGCTGCGG GCCGGCGCCG GCCTGACCCT GCCCCGACTC
AAGGTCCTGC GGCTCGTCGC GGAGACCGGC CCCCTGCGGC TGCGGGACCT GGCGAGCGCC
GTCTCCGTGG CACCCCGGAC GATGACCGAG ACAGTGGACG GGCTGGAGGC CGACGGCCTC
GTGCGCCGCC AGATCGACCC GGCCGACCGC CGCGCGGTCC TGCTGGAGCT GACGCCGGAG
GGAAAGACCA CGCTGGAGAC CGGGCGTGCC TGCGCGTCGG CCGCCGTCCG ACGCTTCACC
GACGGGTTGT CGGCGGATGA TCGGGCCACT CTGGGCCGGC TCCTGGCGCA GGTGCGGGAC
AACGCGGCTG CCGTTAACAC GGTGCCGTTA CCGTGA
 
Protein sequence
MPPPDTGDEV VDLILALGHQ VRRGVNESLR AGAGLTLPRL KVLRLVAETG PLRLRDLASA 
VSVAPRTMTE TVDGLEADGL VRRQIDPADR RAVLLELTPE GKTTLETGRA CASAAVRRFT
DGLSADDRAT LGRLLAQVRD NAAAVNTVPL P