Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7268 |
Symbol | |
ID | 5675569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8872097 |
End bp | 8873263 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641246105 |
Product | transketolase central region |
Protein accession | YP_001511493 |
Protein GI | 158318985 |
COG category | [C] Energy production and conversion |
COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.801653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.16375 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGACCA GCGATACGGC CACGGGGGCG GCAACCGGCC CGATCGGCTC TATCGACGCC ATCGACCCGG GTCCGGTCGA TCCGGTCTCC ATCGGTCCGG ACTCGATCGC TCCGGACTCT GTCGGTTCCG TGGGCCCGGC GACGGACGGG GAGCCGCCGG CGAGCCCCCG CCAGACCCTG ACCCTGGCGA AGGCGCTGAA CACGGGCCTG CTCTCGGCCA TGGCCGCCGA CCCGAAGGTC GTGATCATGG GCGAAGACGT CGGCAAGCTC GGCGGCGTCT TCCGTATCAC CGACGGCCTG CAGGCCCGGT TCGGCGAGGA CCGCGTCATC GACACCCCGC TCGCCGAGTC GGCCATCGTC GGCACCGCCA TCGGCCTGGC CATGCGCGGG TTCCGCCCGG TCTGCGAGAT CCAGTTCGAC GGCTTCGTCT ACCCGGCGTT CGACCAGATC GTCAGCCAGC TCGCCAAGCT GCACTACCGC TCGGCCGGAC GGATCCGGCT GCCGGTCACG ATCCGCATCC CCTACGGCGG CGGGATCGGA GCGGTCGAGC ACCACAGCGA GTCACCCGAG GCGTACTTCT GCCACACCGC CGGGCTGCGG GTCGTCACCT GCTCCAACCC TGCCGACGCG CACCTCATGA TCCAGCAGGC GGTGGCCTCG GACGATCCAG TGATCTTCCT GGAGCCCAAG CGCCGTTACT GGGAGAAGGG CGAGGTCGAC ACCACCCCAC TCGCCAGCAT GCCGGTGCAG GAGCAGCTCG CGCTGCACAC CGCGCGGGTG GTGCGGCCCG GGGCCGACGC CACCCTGGTC GCCTACGGCC CGATGGTCCG CACCTGCCTG GACGCCGCCC AGGTGGCCGC CGAGGACGAC GGCAGCTCGC TCGAGGTGAT CGACCTGCGC TCGCTCTCGC CGCTCGACCT CGACCCGGTC GTCGAGTCGG TGCGCCGCAC GGGACGTCTC GTGGTGGTGC ACGAGGCTCC GTCGAACGTC TCGCTGTCCT CGGAGATCGC GGCCCGGGTC ACCGAGCAGG CGTTCTACCA CCTGGAGTCG CCGGTGCTGC GGGTCACCGG GTTCGACACC CCGTACCCCC CGGCCCGGCT GGAAGACCAC TACCTCCCCG ACGTCGACCG GATCCTCGAC GCCGTCGACC GATCGTTCGG CTACTGA
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Protein sequence | MTTSDTATGA ATGPIGSIDA IDPGPVDPVS IGPDSIAPDS VGSVGPATDG EPPASPRQTL TLAKALNTGL LSAMAADPKV VIMGEDVGKL GGVFRITDGL QARFGEDRVI DTPLAESAIV GTAIGLAMRG FRPVCEIQFD GFVYPAFDQI VSQLAKLHYR SAGRIRLPVT IRIPYGGGIG AVEHHSESPE AYFCHTAGLR VVTCSNPADA HLMIQQAVAS DDPVIFLEPK RRYWEKGEVD TTPLASMPVQ EQLALHTARV VRPGADATLV AYGPMVRTCL DAAQVAAEDD GSSLEVIDLR SLSPLDLDPV VESVRRTGRL VVVHEAPSNV SLSSEIAARV TEQAFYHLES PVLRVTGFDT PYPPARLEDH YLPDVDRILD AVDRSFGY
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