Gene Franean1_7249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7249 
Symbol 
ID5675550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8852069 
End bp8852383 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content72% 
IMG OID641246086 
Producthypothetical protein 
Protein accessionYP_001511474 
Protein GI158318966 
COG category[K] Transcription 
COG ID[COG5450] Transcription regulator of the Arc/MetJ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.121942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0443202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTCGGTG ACGGTCGCCC GTACCCCGAT CATGGTCTTG GCCAGCGGGA CTGGGCCGCC 
ATCCCGCCGC GGCAGGTGCG GCTCGACCAG CTCATCACGA CGAAACGGGT GCTGGCGCTC
GACGTCCTGC TGGACGAGGA CTCGACGTTC TACGGCGACC TGTTCCCCCA CGTCGTGGAG
TGGGGCGGGG CGCTCTACCT GGAGGACGGC CTGCACCGCG CCGTGCGCGC GGCGCTGGCG
CAGCGGACGT CCATCCACGC CCGGGTGCAC GTGCACACCG CGGCACGGCC GGCGGGCAGG
CTCAGCCACC AGTGA
 
Protein sequence
MVGDGRPYPD HGLGQRDWAA IPPRQVRLDQ LITTKRVLAL DVLLDEDSTF YGDLFPHVVE 
WGGALYLEDG LHRAVRAALA QRTSIHARVH VHTAARPAGR LSHQ