| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7239 |
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| Symbol | |
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| ID | 5675540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8839011 |
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| End bp | 8840720 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641246076 |
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| Product | peptidase S1 and S6 chymotrypsin/Hap |
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| Protein accession | YP_001511464 |
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| Protein GI | 158318956 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.108633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.212332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCA CGCACGACGC CCGGTCCCCT TGGGCTCCGC CCGACAACGC GCCGGAGCGG
ACCAGGGCCG AGGCGAACAG TTCGGAGGGG TCGGTGGACC CGCGGTCGAA TCCCGTCGAA
CACCAGCAGT ACCCCGGTAC GCCGCCGGCC GGCGGCCCGC CGCCCGGGCC CGGCCCGAGC
CGTCCTGACC AGACCGGCGG TTTTCCGGCG GGCCCCCCGC CGGCGCCGCA CCCGGCCGGG
CCGGCGCCCG GCACGGGCGC GCCCGGCGGG CCCTACGAGC CGGGCCCGCA GCAGGGCCCC
CGGCCGACCG CGCCCTACGC CCAGACCTCC GGCTGGGCCG ACCCCCGCTC CACCGCCGGC
GCTGGCGACA GCACGCAACG GGTCGACCAG GGCGGCCCGG CCACCGGCCA GGGCCAGCAG
CAGTCCGGCG CGTGGTGGAA CCCCGGGCAT CCCGGCTGGG GCGCCCCGGT GCCGCCCGGA
GCGGCTCCCG GCGGTCAGGC ACCCGGTGGC CAGGCGCCCG GGTCACCGGG CGGCTCCGAT
CCCTACGGGC GGTTCACCCC GGCGAAGCCG AACCCGGCGC CCATGCGCCG GCGTCGGATG
ATCGCGGCCG CGCTGGCGAT CGCGCTCGTG TCGGGCGGCA TCGGCGGCGG CGTCGGCGCA
CTCGTCGCCA GCGACGACTC CCCGGCGGTG GTGACCTCCT CCGCCGGCCT GCGGCAGTCG
ACCGGCACGG CCGGCGTCTC CCCGGCCGCG GACAACACGG TCGCCGCGGC CGCGCAGGCG
ATCCTGCCCA GTGTCGTGAC GATCGCCGAA CAGTCCAGCC AGGAGTCGGG CACCGGCTCC
GGGACGATCA TCCGCGCGGA CGGCTACATC CTCACGAACA ACCACGTGGT GTCCGGCGCC
TCGCAGGGCG GCACCCTCAC GGTCACGATG CAGGACGGCC GGACCTTCGA CGCGCAGGTC
AAGGCGACCG ACCCGAGCTC CGACCTCGCC GTGGTCAAGA TCGACGCTAC CGGCCTGCCC
GCTGCCACGT TCGGGGACTC CGACGCACTG CAGGTCGGCG AGCTCGTCGT CGCTGTCGGC
AGCCCGCTGG GCCTCAACGG GACGGTCACC TCCGGCATCG TCAGCTCGCT GCACCGGCCC
GTCCGCACCG GCGACGCGAC CGTGCGGGAC CAGCAGAACA CCGTCCTGGA CGCGATCCAG
ACCGACGCGC CCATCAATCC CGGCAACTCG GGTGGGCCGC TGGTGAACAG CAAGGGCGAG
ATCATCGGCG TGAACACCGC AATCGCGACG GTCGGCGGCA GTTCACCCTT TGGTGGTAGT
CAGCAGTCCG GAAACATCGG GGTTGGTTTC GCGATTCCGG GCAACTACGC GGAGAAGGTC
GCCGGCCAGC TCGTCGACAA CGGCGCAGCG CAGCACCCCT ATCTGGGTGT GAGCGCCTCC
ACCGCCGACG AGAACACCCG GTCGACGGCC GCGAGTGGGA CGGGCGCGCA GATCCGCTCC
CTGGTCAGTG GAGGCCCGGC AGACAAAGCG GGCCTGCACG TAGGTGACGT CATCACCAAA
GTGGGGGATC GCGCCGTCAC CGACGTGGAT TCGCTGATCG CCGCCGTCCG GTCCTACGAG
ATCGGCAACC AGGTGCAGGT CACCTACCAG CGCGACGGCT CCAGCCAGAC CGCGACGGTC
ACGCTGCTCG AACAACCGCC CAATTCCTGA
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| Protein sequence | MTTTHDARSP WAPPDNAPER TRAEANSSEG SVDPRSNPVE HQQYPGTPPA GGPPPGPGPS
RPDQTGGFPA GPPPAPHPAG PAPGTGAPGG PYEPGPQQGP RPTAPYAQTS GWADPRSTAG
AGDSTQRVDQ GGPATGQGQQ QSGAWWNPGH PGWGAPVPPG AAPGGQAPGG QAPGSPGGSD
PYGRFTPAKP NPAPMRRRRM IAAALAIALV SGGIGGGVGA LVASDDSPAV VTSSAGLRQS
TGTAGVSPAA DNTVAAAAQA ILPSVVTIAE QSSQESGTGS GTIIRADGYI LTNNHVVSGA
SQGGTLTVTM QDGRTFDAQV KATDPSSDLA VVKIDATGLP AATFGDSDAL QVGELVVAVG
SPLGLNGTVT SGIVSSLHRP VRTGDATVRD QQNTVLDAIQ TDAPINPGNS GGPLVNSKGE
IIGVNTAIAT VGGSSPFGGS QQSGNIGVGF AIPGNYAEKV AGQLVDNGAA QHPYLGVSAS
TADENTRSTA ASGTGAQIRS LVSGGPADKA GLHVGDVITK VGDRAVTDVD SLIAAVRSYE
IGNQVQVTYQ RDGSSQTATV TLLEQPPNS
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