| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7237 |
|---|
| Symbol | |
|---|
| ID | 5675538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 8836043 |
|---|
| End bp | 8837932 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 641246074 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001511462 |
|---|
| Protein GI | 158318954 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0824468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.337859 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGACG GTGCGTGGAG AGGTGACCCT CGGGATCCGG CTGGGCCCGG CTACCGGGAA
CGGCCGCCCG GCGCACCGGA CGACCCGGGG CCGGACGGCT ACTGGGACGG CCCGGACCAG
CATCAGCAGT ACCGGAACGA TCCCCGCGGC AACGGTTCCC ACCAGGGCGT GCCGCACTAC
CAGGGCGGCC CGCCCGCGGG ATATCCCGAC GGCCCCCAGC CGGGCGGCGC CTACCAGCAG
CCGGGATACC CGCCGGCCGC CGACCCCGGG CGCGCCTACG GCTCCGGCCC CGGTGGGGGT
CCCTACCCGC CGGCAGGACC GGCGGGAGGC CAGTACTCGC CGCCGCCGCC CGGTCCCGGT
GCCCGCCCGC CCGCGGGTGG TGGCGCCCCC TATCCTCCGG GCGGCCCGGG CCCCGCGACC
GGCCCGTACC CGCCGCCCGG CCCCGCCACG GGCGGCTACC CGTCGGCGGA CGGCCCGAGC
GGCCCGGCCA GCCCGGGCGC TCCGGGCGGT GGGGGTGCCC GCCGGGACTC GACCTCCGTC
CGCGGTGCCC TGGTGCCGCG CGCCGGCGCC GGCCGTGCCC CGACGCGCCC GCCGGGGTCG
ACCGGTCCGG CGCCGCGGCA GGCCCCCGAG CGGGGGAGCG CGGTAGATGC CGGCGCCGCC
CGTCCGGACC TGTATCAGCC GGAGCCGTCC CGAGCGGCCG CGCGCCCGGG GACGGACGCG
GGCGCGCGCC GGGGCGGTCC CGACCCGGCC TACCGGGACG CGGCGTACCC GCAGATGGCA
CACCGCGACG TCGCGGTGCC CGACGCCGAC CCGCGCGACG CCGGGCGGCG GGACGTGCCC
TACCGCGACC GGGAACGCGG ATACCGCGAC GGACCCGCGC GGGACACGCC GTATCGCGAC
CCGGACGGCC CGGCTGACGA CGACGGCCGC GGCCCGATGC CCGGCACCGG CCCGCGCGCG
CGGGCCCGGG CCGCCCGGCG CGCCGGCGGC CAGGACGGCA CCGGCCCGCA GGACCGGGCC
AGATCCACGG GCGCCGGCAC CGAGGTGCTG GGAGCCGTCG GCGCGGCTTC CGCCGGGACC
GGGCCGCGCC GGGCCGCGCC CCCGCGGCAG GGCGGCTTCG ACGAGGTCGA CTTCCCCGGC
GAACCTGACT TCCCGGACGA TGGCGACGGC CTCGACGGTC CGGACGGCGG CGAGAGCGCC
GGGCTCGGGC CCTTCCTGCG CCGCCTCGTG ATCGCCCTGG TCGTGCTCGG CGTGGCCCTC
GCGGTGGGCG TCGGTGCCGG CGTCATCTGG GAGAAGGTGC GCCCGAGCGG CGATACGGCG
ACGACGGCGA ACACGCCCCC GACGGCGACG CCCGGCACGG GCCCGTCGGC TTCCCCCGCG
CCGTCCACCG GTGCCCCCGC GGGCGGCGGC CAGCCGCAGG CCGCGGTGCC CGCGGACTGG
GTGGCCTTCA CGGACCCCGA CCAGAAGGCG ACGTTCTCCC ATCCGCCGAC CTGGAAGCAA
CGACGGGACA ACACCGGTGT GTTCTTCGGG GAGCCGGGGG CGGGCGCGGT GGGCACACCC
GCCGAGTACG GCCCGCAGAT GATCGGCGTC GCCCGGGTCG CGGGCGCGGA CGCCGCGACG
GCGCTCAGCC AGGTCCAGAG CAGTGAGTTC GGCAGCGTCT CGGGCCTGAC TCAGGACCGC
TCGGGCCCGG CGACGGACAC GTCCGGCGCG ACTGTGCAGG AACTGGCGGG CTCCTACGAC
CGTGACGGCC AGCGCGTCTC GTACCTCATG CGCACGAGCG AGGCGCCCGG CGCGGTCTAC
GTGCTCATCG CCAGGGTTCG GGCGGACGCC TCGGCGTCAC TGAACACGAT GATGGGCGCG
CTGCGCGCCT CGTTCCAGCC GGCCGCCTGA
|
|---|
| Protein sequence | MTDGAWRGDP RDPAGPGYRE RPPGAPDDPG PDGYWDGPDQ HQQYRNDPRG NGSHQGVPHY
QGGPPAGYPD GPQPGGAYQQ PGYPPAADPG RAYGSGPGGG PYPPAGPAGG QYSPPPPGPG
ARPPAGGGAP YPPGGPGPAT GPYPPPGPAT GGYPSADGPS GPASPGAPGG GGARRDSTSV
RGALVPRAGA GRAPTRPPGS TGPAPRQAPE RGSAVDAGAA RPDLYQPEPS RAAARPGTDA
GARRGGPDPA YRDAAYPQMA HRDVAVPDAD PRDAGRRDVP YRDRERGYRD GPARDTPYRD
PDGPADDDGR GPMPGTGPRA RARAARRAGG QDGTGPQDRA RSTGAGTEVL GAVGAASAGT
GPRRAAPPRQ GGFDEVDFPG EPDFPDDGDG LDGPDGGESA GLGPFLRRLV IALVVLGVAL
AVGVGAGVIW EKVRPSGDTA TTANTPPTAT PGTGPSASPA PSTGAPAGGG QPQAAVPADW
VAFTDPDQKA TFSHPPTWKQ RRDNTGVFFG EPGAGAVGTP AEYGPQMIGV ARVAGADAAT
ALSQVQSSEF GSVSGLTQDR SGPATDTSGA TVQELAGSYD RDGQRVSYLM RTSEAPGAVY
VLIARVRADA SASLNTMMGA LRASFQPAA
|
|---|
| |