| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7236 |
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| Symbol | |
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| ID | 5675537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8834748 |
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| End bp | 8835965 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641246073 |
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| Product | putative LpqP (hydrolase/esterase) |
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| Protein accession | YP_001511461 |
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| Protein GI | 158318953 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0397136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.31443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGCCG CCCGCAGCCG CCGCTTCGTC GCGGTACGGC TTCTCATGTC CTTGCTCGCG
GCATTGCTGG TCGTGGCCGG GTGCGGGCTC GCGGGCGGTG CCGGGCCAAG TGCCCGGCCC
GGCCCGACGA GCGACGAGGG GACCATCCCC ACCCCGCCGC CGACGATCGG TCCCGATGCC
TTCGAGCAAA GTGGACGGGG TGGTCAGATC CGGCTGACGC TGCCGGACAC GGGCACGCCG
GGGCCGTACC CGCTGGTCGT GGCGCTGCAC AGCCTGTACC ACGATGGCAC CGAGCCACAG
CGCGGCTGGG GGCTCGACGC GCTCGCCCGG TCGGCCGGCT TCGCGGTCGT CTACCCCGAC
GGGCTGGGGA TGTCCTGGAA CGCGGGCACC TGCTGCGGCC CGGCCGCGGC CGCCAGCAGT
GACGACGTCG GCTGGCTGCG TTCACTCATC GCGCACCTGG AGAGCAGGTA CCCGATCGAT
CCGCGCCGGG TCAGCATCAT CGGGCTGTCG AACGGCGGCA TGCTCGCCTA CCGCTACGCC
TGCGAGCACG GGGACGAGCT CGCCGGGTTC GCGGTCGTCG CCGCCAGTCT GCAGACCTTC
AACTGCACTC CGCCCGCGCC CGTAACCATG GTGTCGGTGC ACGGCGGAAT GGACGGCCAC
GTCCCGTACG CCGGCGCGCT GTGGTCCGAG GCCCTGCAGA CGGGGATCAC GCCCGTCGAG
GTGAGCCTCG CCCCGTTCCG GGCGGTGGAC GGCTGCCCGT CACCCACCCA GCCCGCCGAC
ACCACGACCA CCGGCGCGGA CGGCCGTCCG ATCGGCGCGA CCGGAGCCCA GGTCGGGGCG
GTGGACCCGG CCGGGTCCGG CACCGCCGGG CCAGCCGACC CGGCGATCAT CGCCGCCGCC
GGCCCCGGGC TGCTGCCCGC CACCACACCG CCGGCGGCCG GCCAGGCACC GCTCGGCCAG
GCACCGCTGG GGCAGCCGCC GGCGACGGGA CCGGGCGCGC CCGCGGCCCA GCCGCCCGCG
CCGCCCGTCC AGGCGCCGCC GGTGGCCGTC CGGCACGAGA CGACCTGTTC GACGTCCGCC
CGCCTCGTGC AGTACGTGCT GCCGGCGCTG GGGCACGGCT GGCCGCCGCT GACCGGCGCC
GGCTCCTTCG ACACGGCCGC CGTGCTGTGG GAGCTGCTGG GGCCGGCCCG CTCGGCCACC
GCCGGCCCCC GGATCTGA
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| Protein sequence | MSAARSRRFV AVRLLMSLLA ALLVVAGCGL AGGAGPSARP GPTSDEGTIP TPPPTIGPDA
FEQSGRGGQI RLTLPDTGTP GPYPLVVALH SLYHDGTEPQ RGWGLDALAR SAGFAVVYPD
GLGMSWNAGT CCGPAAAASS DDVGWLRSLI AHLESRYPID PRRVSIIGLS NGGMLAYRYA
CEHGDELAGF AVVAASLQTF NCTPPAPVTM VSVHGGMDGH VPYAGALWSE ALQTGITPVE
VSLAPFRAVD GCPSPTQPAD TTTTGADGRP IGATGAQVGA VDPAGSGTAG PADPAIIAAA
GPGLLPATTP PAAGQAPLGQ APLGQPPATG PGAPAAQPPA PPVQAPPVAV RHETTCSTSA
RLVQYVLPAL GHGWPPLTGA GSFDTAAVLW ELLGPARSAT AGPRI
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