| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7235 |
|---|
| Symbol | |
|---|
| ID | 5675536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8833979 |
|---|
| End bp | 8834710 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641246072 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001511460 |
|---|
| Protein GI | 158318952 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0189228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.46326 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGCGC GGCGTCGGCG CCACGCCGCA CGACGGTGGG AGACACCTAC GCCAGGACGC
AACGCGGACG AGCAGGACCT CGCGGGGGGC GACGCCGCAC CGGCGTCGAG AGATTGCGAG
CGAAGGGACA TCTCGGTGAA CGAGCCATCC GACATGGAAC GTTCACGGCT GCTCCTCGGA
TGGCTGGCGG CTCGCAGGGC AGTGGACCAC TGCCTGTCCG ATCTGCTGGC CGCCGGCCCG
GCCGGCGAAC GACGGGTCCG CGAATCGCTC GCGAAGGTCG ACGACCTGGA GACCCGCGCG
CAGGTCGCGT TCGATCGCTA CCGGAGCGCG GCCGAGTCCA CCGAGCCCCG CGGGCTCGGC
GCGGACCGCG CCCAGGCGAC GCGGATCATG GACGCGAGCA CCGCCGGCTC CGGGGCGGGG
GCAGCCGAGG ACGGTCGCGA CAGAACCAGG ATCGACAGGA GCAAGTCAGA CAGGGGCAAG
GTCGACAGCG GGGTGTCGGC GGTCCCGAGC GGCGATCCGC GCTCGTTCGA CGTCGACTCG
AGGAACGTCA TGCCCCTGCC CGTGAACCCG CGTGGCATGG CCCCGGCCGG AAGAGAACCG
ACAGGTGGGG AGCCGGCCGT GCCCGAGCGC TGGTCCCCAC GTGACCGGCC CCGCCTGAAC
GTGGTACGGG CAAATGAGAA CGACCTCGCA CGTAGCAGCC CTAACACTAA GAGTAATCAA
CGACACCGTT GA
|
|---|
| Protein sequence | MAARRRRHAA RRWETPTPGR NADEQDLAGG DAAPASRDCE RRDISVNEPS DMERSRLLLG
WLAARRAVDH CLSDLLAAGP AGERRVRESL AKVDDLETRA QVAFDRYRSA AESTEPRGLG
ADRAQATRIM DASTAGSGAG AAEDGRDRTR IDRSKSDRGK VDSGVSAVPS GDPRSFDVDS
RNVMPLPVNP RGMAPAGREP TGGEPAVPER WSPRDRPRLN VVRANENDLA RSSPNTKSNQ
RHR
|
|---|
| |