| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7232 |
|---|
| Symbol | |
|---|
| ID | 5675533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8829765 |
|---|
| End bp | 8830652 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641246069 |
|---|
| Product | ErfK/YbiS/YcfS/YnhG family protein |
|---|
| Protein accession | YP_001511457 |
|---|
| Protein GI | 158318949 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.729107 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCG GCGCCGGCAT GACCAGCCAC GTCGCGACTC CTCGCCACGA CGCGACGTCC
AACCGCGGCC CGCTGCCCGG CCGCGATCCG GCACCGGGTG GTGACAGCCT GGCCGAGGAG
CGCCGGCCGG GGCGTCGCGG CCTGGCCCGG GTGGGCACGG CGGCGCTGGC CGTCGTGCTC
GGCGGCGTGA TCCTCACCGG CTGCGGCGGG GACGACTCGA CCGCGGCGTC CGGCCAGGTC
CCGGAGCCGG TGCGCAGCCA GCTCGCCGCC GTCGCCGGCC TCGGGCAGGG CGCGAGCACC
GTCGTGACCG CCACCGGCGC GAGTGTCGAC GTCTACCAGG CGCCGAACGC GGCGAAGCCG
ACGTCCAGCC TGTCGAACCC GAACGAGAAC GGCGCGCCGC GGGTCTTCCT CGTCCAGGCG
AAAATGCCGG GCTGGTGGCA GGTTCTGCTG CCCGTCGAGC CCAACGGGAG CTCGGGCTGG
GTGAAGGCCG AGCAGGTGAC AGCCAGCCAG ACGCCCTACC GGATCGTCGT CGCCCGCGGC
GCGCACAAGC TGCGGCTGTA CAGCAACGAC AAGATGATTG CGGAAGAGTC GGTGGCGATC
GGCACCACCG ACACCCCGAC GCCTGGCGGG CGCTTCTTCC TGATGGAACT ACTGAAGCCC
AGCAACCCGG GCGGCCCCTA CGGGCCGTAC GCCTTCGGGC TCAGCGGCTT CTCCACCAGC
CTGGACTCGT TCGGCGGCCG GGACCCGGTG ATCGGCATCC ACGGGACGAA CGAGCCCGGT
TCGATCGGCC GGGACGTCAG CCACGGCTGC ATCCGCCTGA GCAACGACGC GATCACCCGA
CTGGCCCAGA CCGTCCCGCT GGGGACACCG GTGGAGATCA TCGCCTAG
|
|---|
| Protein sequence | MTSGAGMTSH VATPRHDATS NRGPLPGRDP APGGDSLAEE RRPGRRGLAR VGTAALAVVL
GGVILTGCGG DDSTAASGQV PEPVRSQLAA VAGLGQGAST VVTATGASVD VYQAPNAAKP
TSSLSNPNEN GAPRVFLVQA KMPGWWQVLL PVEPNGSSGW VKAEQVTASQ TPYRIVVARG
AHKLRLYSND KMIAEESVAI GTTDTPTPGG RFFLMELLKP SNPGGPYGPY AFGLSGFSTS
LDSFGGRDPV IGIHGTNEPG SIGRDVSHGC IRLSNDAITR LAQTVPLGTP VEIIA
|
|---|
| |