| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7230 |
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| Symbol | |
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| ID | 5675531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8827880 |
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| End bp | 8828644 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641246067 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_001511455 |
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| Protein GI | 158318947 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.714905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCC ATCCGCCCAT GCACGAACCG CCCGTGTATG AACCGCCCGT GCCCGACCCG
GCTGTGCAGC GGCGCGGCTA CCACCCGGGC CGGTTCGACG AGCGGATGCT CGCTCCAACC
TGGCTCGAAC AGTTTCAGGA ATGGTTCACC GACGCCTCGG CCCCGAGGGC GGGGATCCGC
GAGCCCAACG CGATGATCTT CTCCACCGCC GACGAGGCCG GGCGGCCGAG TTCCCGCACC
GTCCTGATGA AGGGGTTCGA CGCACGCGGA TTCACGCTGT TCACGAACTA CACGTCGACG
AAGGCCCGCG AGGCCGCGGC GAATCCGTAC GGGTCGCTGC TCTTCCCGTG GTACCCGCTG
GAACGCCAGG TGATCGTCGC TGGTTCGATT GAACGCGTGT CACGGGCGGA GAGCGAGACC
TATTTCCGGT CCCGGCCGCG GGGATCTCAG CTCGGGGCGT GGGCGAGCCA CCAGTCCCAG
GTGATCGACT CGCGCGCGGT ACTCACCGAG CGGCTCGCCC AGCTGAGACA GAGGTGGCCG
GCCACCGAAC CGGTGCCGGC TCCCCCCTTT TGGGGGGGAC TGCGGCTCGT CCCGACCTCG
ATCGAGTTCT GGCAGGGGCG CCCGGACCGC CTCCACGACC GTCTGCGCTA TCGCCTAACC
ACTCTCCGTC GAGCCTCCGG CAGCACACCG GACGCCGGGC CGGGCGACGT ACCGAGCAGG
CCCGCCGACG CCCTGGGATG GGTCGTCGAG CGCCTGGCGC CCTGA
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| Protein sequence | MAAHPPMHEP PVYEPPVPDP AVQRRGYHPG RFDERMLAPT WLEQFQEWFT DASAPRAGIR
EPNAMIFSTA DEAGRPSSRT VLMKGFDARG FTLFTNYTST KAREAAANPY GSLLFPWYPL
ERQVIVAGSI ERVSRAESET YFRSRPRGSQ LGAWASHQSQ VIDSRAVLTE RLAQLRQRWP
ATEPVPAPPF WGGLRLVPTS IEFWQGRPDR LHDRLRYRLT TLRRASGSTP DAGPGDVPSR
PADALGWVVE RLAP
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