Gene Franean1_7223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7223 
Symbol 
ID5675524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8819236 
End bp8819661 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content74% 
IMG OID641246060 
ProductMarR family transcriptional regulator 
Protein accessionYP_001511448 
Protein GI158318940 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.648034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGCG TGAGCGCGGC GGAGCTCGCG TCCACCCTGC GCCTGTCGGT CATGAGGCTC 
TCCCGGCGAA TGCGCCAGGA ACGCTCCAGC ACGCTGACCC CGACCCAGGT CGCCACGCTC
GCCACGCTCG ACCGGCACGG GCCGATGACG CTCGGTGAGG CGGCGGCGCA CGAGCGGGTG
CAACCACCGT CCATGACCCG GGTGATCGCG ACCCTGTCCG AGGCCGGCCT CGTCCATCGT
GGTCAGCATC CCTCCGACGG CCGGCAGGTG ATCGCCGAGG TCACCGAGGC CGGCCGGGAG
CTGCTCGCCG CGGACCGCCG CCGCCGTGAC GAGTGGCTGG CCGAGCGCCT GGTGGATCTC
TCCCCGGCCG AGGCCGACGC GCTGCGGGTC GCCGCCCCGA TCCTGGACCG CCTGGCCGGC
CTGTAG
 
Protein sequence
MESVSAAELA STLRLSVMRL SRRMRQERSS TLTPTQVATL ATLDRHGPMT LGEAAAHERV 
QPPSMTRVIA TLSEAGLVHR GQHPSDGRQV IAEVTEAGRE LLAADRRRRD EWLAERLVDL
SPAEADALRV AAPILDRLAG L