Gene Franean1_7222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7222 
Symbol 
ID5675523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8817842 
End bp8819167 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content73% 
IMG OID641246059 
Productmajor facilitator transporter 
Protein accessionYP_001511447 
Protein GI158318939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.237478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGGT CGCTGTCGGT CCGCAACTTC CGCCTCTTCG CATCCGGCCA GCTGGTCTCG 
CTGATCGGGA CGTGGATGGG CATGACCACG CTCGACTGGC TGGTGCTGGC CCTCGGCGGC
GGCGGGACGG AGCTGGGGAT CACCCTGGCG CTCCAGTACG GCCCGATGCT GCTGTTCGGG
CTCTACGCCG GCGTCGTCGC CGACCGGTTC CCCAAGCTGC GGCTGCTGCT GATCACCCAG
AGCTCGGCGG CGGTGCTGTC CGTCGCCGCA TGCGCGCTGA TCGCTTCCGG GGCGCTGCGC
ATGCCGATGC TCTTCGTCCT CTCGGGCCTG CTCGGCGTGG TGACCTCCTT CGACGCTCCC
ATCCGGCAGG CGTTCATCGT CGAGATGGTC GGTGCCCCGC TGCTGCCGAA CGCCGTCGCG
CTGAACAGCA TGATCTTCAA CGCGGGACGG ATCGCCGGAC CGGCCGCGGC CGGCGGGCTT
ATCGGCATCG CGGGCACCAT GCCCGGCGCG GCCTGGGTGT TCGGCCTCAA CGCGCTGTCG
TTCGCCGCGG TGCTGACCGG CCTGGCGCGC ATCCGTACCG GGGATCTCCT GCCGGCCCGA
CCCGTCCAGC GGGCCCGGGG GCAGCTGCGT GCGGGGCTGA GCTACGCCGT TCGGCACCGC
GAGATCGCCA CGCCCATCCT GCTGGTGGGC ATCGTCGGCG CCCTGGGGCT GAACTTCCCC
GTCACGGTCG CGCTGATGGC CAGCGAGCAG TTCAGCGGGA CGGCGGCCAC CTACGGCCTC
CTCACGGCGA TGCTGGCGGT CGGCTCCATC GCGGGCGCGG CCGTGTCGGC GCGGCGCCTG
GACGTCCCCC GCCACACCAC GCTCATCGTC GCGACGGCGG CCTTCGGGGT CTCGGAGACC
CTGTTCGGGC TGATGCCGAA CCTGTGGCTG TTCGCGCTGC TGGCCATCCC GACCGGCGCC
TGTGTGCTGC TGGTCAGCAC CATGGCGAAC GCGCTGGTGC AGCTGAGCAC CGACGATGCC
ATGCGGGGCC GGGTGATGGG CGTGTTCCTG CTGGTCTTCA TCGGCACGAC GCCGATCGGC
GCCCCGATCG TCGGGGCGGT CTGCGAGGCG TTCGGGCCGC GGGCCGGCCT CGCTCTCGGT
GGGGTGAGCT CGCTGCTCGC CGCCGCGATC GTCGCGCTGT TCGACCTGCG CCGCCCGCCC
GCCGCGGCAC GGGCAGCCGG CCCCGGCCCC GCGGGGCCGG GGCTCGCCGT GGGCGGGCTC
AAAGCTCGAC CCAGCCACCC CGCTTGTGAG ACGCCGCGGC CGCCACCTGC AGGCGCGTCG
CGGTGA
 
Protein sequence
MFRSLSVRNF RLFASGQLVS LIGTWMGMTT LDWLVLALGG GGTELGITLA LQYGPMLLFG 
LYAGVVADRF PKLRLLLITQ SSAAVLSVAA CALIASGALR MPMLFVLSGL LGVVTSFDAP
IRQAFIVEMV GAPLLPNAVA LNSMIFNAGR IAGPAAAGGL IGIAGTMPGA AWVFGLNALS
FAAVLTGLAR IRTGDLLPAR PVQRARGQLR AGLSYAVRHR EIATPILLVG IVGALGLNFP
VTVALMASEQ FSGTAATYGL LTAMLAVGSI AGAAVSARRL DVPRHTTLIV ATAAFGVSET
LFGLMPNLWL FALLAIPTGA CVLLVSTMAN ALVQLSTDDA MRGRVMGVFL LVFIGTTPIG
APIVGAVCEA FGPRAGLALG GVSSLLAAAI VALFDLRRPP AAARAAGPGP AGPGLAVGGL
KARPSHPACE TPRPPPAGAS R