Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7210 |
Symbol | |
ID | 5675511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8803104 |
End bp | 8804975 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641246047 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_001511435 |
Protein GI | 158318927 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCACACG TCGCCCACAG CGACGACCCC GCATCTCGCC GGGAGTCGAC GTCCGTCCGC CGCCCGCCGC AGTCTCGCGA CGGCCGCCGT CGCGACGGCC TTCTCCACGG TGCCCCGCGC AACGGTGATC CTCTCGACAG CGATCTTCTC GACGACGATC CCGGCCCGCG CGACGCCTGT GGCGTCTTCG GTGTCTGGGC GCCCGGGGAG GACGTGGCGA ACCTCACCTA CTACGGCCTC TACGCTCTCC AGCACCGCGG CCAGGAGGCC GCCGGGATGG CGGTCGGCGA CGGCCGCACC GTCGTCGTGT TCAAGGAGCT GGGTCTGGTC GCCCAGGTCT TCGACGAGAT CACCCTCTCC AGCCTGTCGG GGCACGTGGC CGTCGGGCAC ACCCGGTACT CGACCACAGG CTCGTCCACC TGGGAGAACG CCCAGCCGTC CTACCGGACG GCGGGTTTCG GCGGGCCGAT CGCGCTCGGC CACAACGGCA ACCTGACGAA CATCGTCGAG TTGGCCGGGT CGCTCGGCGA CAGCGAGGGC GGCCAGGGCG CCACCACCGA CTCCGACCTG ATCACCGCGA TGCTCGCCGC GCATCCTGGC CCGACCCTGG TCGACGCCGC GATGGACGTC CTGCCCCGGC TGGCGGGGGC CTTCTCGCTG GCGTTCGCGG ACGCGTCGAC CCTGTACGCG GCGCGGGACC CGCACGGCAT CCATCCACTG GTGCTGGGCC GGCTCGACGA CCGGCCGGAC GGCGCGTGGA TCGTCGCCAG CGAGACCGCG GCGCTCGACA TCGTGGGCGC CCGCTTCGTC CGCGAGATCG AGCCCGGTGA GCTGGTCGTC ATCGACGCGG ACGGCCCGCG CTCGCTCACG TTCGCGCAGG CCGACCGGCA CGTCTGCCTG TTCGAGTACG TCTACCTCGC CCGCCCGGAC ACGACGATCG GTGGCCGGTC GGTGCACGCC ACCCGGGTCG AGGTGGGCCG GCGGCTCGCC CGGGAGGCAC CGGTCGAGGC CGACCTGGTG ATCCCGGTCC CGCAGTCCGG TGTGCCGGCC GCGGTCGGCT TCGCCGAGGC GTCCGGCATC CCGTTCGGTG AGGGCCTGGT CAAGAACTCC TACGTCGGGC GGACGTTCAT CCAGCCGTCG CAGACCATCC GCCAGCGGGG CATCCGGCTC AAGCTGAACC CGTTGCGCGA CGTCATCGAG GGCCGCCGGC TCGTCGTCGT GGACGACTCG ATCGTGCGCG GCAACACCCA GCGGGCCCTG GTGCGGATGC TGCGCGAGGC CGGGGCGACC GAGGTGCACG TGCGGATCTC GTCGCCCCCG GTGCGGTGGC CCTGTTTCTA CGGCATCGAC TTCGCCACCC GCGCCGAGCT GATCGCCAGC GGCTGTGGCG TGGAGGAGAT CCGGCGCTCG CTGGGTGCCG ACTCGCTCGC CTACGTCTCC CTCGACGAGC TGGTGGAGGC CTCCGAGCAG CCGGCGGACG CGCTGTGCCG GGCCTGCTTC GACGGCATCT ACCCGGTTCC GCTCGCCGAC TCGGACAAGC TGGGCAAGTA CCGGCTGGAG CCGTTCGGGC CGCAGACCAC GGAGGAGGTC ATCGCGCAGG CCCTCCGGGA GCGGGTAACC CTGGGTATGA ACGGCGCGGA CCCGTCCCCC GACAACCACG ATCTCGACCT CGAACCCGTC CCGCTCGAGC CCGCCCAGGA CGTCGGCGCC GCGCGCGCGA ACGGGGCACG GCCCGACGGG ACGAGGGCCG ACGCCGTGGC GGTCGACGGC GCACCGGCCG ACGGGGTGGC CACGAACGGA GCCATCGTGA ACGGGATGAC AGCGGACGGG GTGGCAGTGG ACGGCGCACC GCTGGGCAGC GCGCGGTGGT GA
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Protein sequence | MPHVAHSDDP ASRRESTSVR RPPQSRDGRR RDGLLHGAPR NGDPLDSDLL DDDPGPRDAC GVFGVWAPGE DVANLTYYGL YALQHRGQEA AGMAVGDGRT VVVFKELGLV AQVFDEITLS SLSGHVAVGH TRYSTTGSST WENAQPSYRT AGFGGPIALG HNGNLTNIVE LAGSLGDSEG GQGATTDSDL ITAMLAAHPG PTLVDAAMDV LPRLAGAFSL AFADASTLYA ARDPHGIHPL VLGRLDDRPD GAWIVASETA ALDIVGARFV REIEPGELVV IDADGPRSLT FAQADRHVCL FEYVYLARPD TTIGGRSVHA TRVEVGRRLA REAPVEADLV IPVPQSGVPA AVGFAEASGI PFGEGLVKNS YVGRTFIQPS QTIRQRGIRL KLNPLRDVIE GRRLVVVDDS IVRGNTQRAL VRMLREAGAT EVHVRISSPP VRWPCFYGID FATRAELIAS GCGVEEIRRS LGADSLAYVS LDELVEASEQ PADALCRACF DGIYPVPLAD SDKLGKYRLE PFGPQTTEEV IAQALRERVT LGMNGADPSP DNHDLDLEPV PLEPAQDVGA ARANGARPDG TRADAVAVDG APADGVATNG AIVNGMTADG VAVDGAPLGS ARW
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