Gene Franean1_7183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7183 
Symbol 
ID5675484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8770231 
End bp8770791 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content71% 
IMG OID641246020 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001511408 
Protein GI158318900 
COG category 
COG ID 
TIGRFAM ID[TIGR03618] PPOX class probable F420-dependent enzyme 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCAA GCGCTTCTCC AGCAGCCCGG ACCGCCCCCG GGTCTTACGA TGGCCGGGTG 
AGTCCGACCG CCGCGCGAGA CGTCGTCGTC GACCGTGCCG CCCTGTTGGA CTTCATCCGT
CCCCGGCACC GCGGAATCCT CATGACCACG CGCCGGGACG GCAGGCCACA GGCGTCACCG
GTGACCATGG GCGTGTCCGG CTCCGGGGAC ATCGTGATCG CCACCTACCC GGAGCGGGCC
AAGGTCCGCA ACGCCCGCCG CGACCAGCGG GCCTCCCTCC TCGTGTTGTC CGACGAGTTC
AACGGGGAGT GGGCGCAGGT GGACGGAACG ATCGCGGTCG TCGACCAGCC GGCGGCCGTC
GAGGAGCTCG TCGACTACTA CCGCAGCATC AGCGGCGAGC ATCCCGACTG GGACGAGTAC
CGCCAGGCGA TGGTCCGGCA GGGCAAGGTG CTGCTGCGGC TGCGCGTCGA CGGCTGGAGT
CCGGTCAGTC GCGGCGGCTT CCCGGTCCAC CTGCTCCAGG GCGCCGACCA GCCGAGCCCG
CCGAACCCGG GCGACTCCTG A
 
Protein sequence
MRPSASPAAR TAPGSYDGRV SPTAARDVVV DRAALLDFIR PRHRGILMTT RRDGRPQASP 
VTMGVSGSGD IVIATYPERA KVRNARRDQR ASLLVLSDEF NGEWAQVDGT IAVVDQPAAV
EELVDYYRSI SGEHPDWDEY RQAMVRQGKV LLRLRVDGWS PVSRGGFPVH LLQGADQPSP
PNPGDS