| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7125 |
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| Symbol | |
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| ID | 5675801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8696761 |
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| End bp | 8700966 |
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| Gene Length | 4206 bp |
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| Protein Length | 1401 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641245963 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_001511352 |
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| Protein GI | 158318844 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCCG AGCGTTCGGA GCGCGGCGGA CCGCACGGTT CCGGTGAGGA TTCGCCGGGC
GCCGCGGCCC GGCCGGACCA GCGGACCTCT CGGACTGTGG CCGGGAACGC GGCGGAGATG
CGTACGCCGC CGCTGGTCGA GTCCCAGGCG GCGCCCACCC AGATCATCGA CGGATACCCG
TCGAAGCCAC CGACCAGCGT CCCGCCGGCC GGTGCGTACT CGACGGCCTG CCCGTACCCG
GGGCTGCGCG GCTTCGACGA GTCGAGTGAG CAGTGGTTCT TCGGGCGTGA GCGGATGGTC
GCCGACCTGG TGGCGAGGGT CTCCTCGGAG GCGTCGAGGG TGGGGCCGCT GGTGCTCGTC
GGCGCCTCGG GGTCGGGGAA GTCGTCACTG CTGCGTGCCG GGCTCCTGCC CGCCCTCGCG
CGCGGAGCGC TTCCCGGCTC GCGTGGCTGG CCACGGCTGG TGATGACACC GGGCGAGCAC
CCGCTCGAGG CGCTCGTCCA GCGTGTTGTC GAGGCGACCG GGATGCCGAC GATGGCGCGG
ATGCTGGGTG ACAGCCTGCG CCGGGAGCCG GAGCGGCTCA GCGAGATCGT CCGTGAGCTG
CTCGCCGCGC GCGCCACGCC TCGGTCTGCC CCAGAGGGGG GCGAGACCAC GATCCGCCGC
GGCCCACGAA ACGACGCCAC CACGCTCTAC AGGCCAGGCA ACCCCCACGA GCCAGCCGAT
CCCCGCGAGC CGCGTGAATC CGCCGCGCCG CACGAACCCC GCGAGCTCTC CGCGTCACGC
GCGCCCCTCA AACCCGCCGT GCCCCACGAA CCCCCCACAC CGCGCAAAGC CCACGAACCA
CGCAAAGCTC ACGAACCACA CGCTCCGCAC GAGCCGCGGA TGGTGATCGC GGTCGACCAG
TTCGAGGAGG TTTTCACGCT CTGCGCGGAC CAGGCCGAGC GGGAGGCTTT CGTCCGGGCC
CTGTGCGCGA CCGCGGCGGG CAGTGCGGTC GTCGTGATCG GCCTGCGGGC GGACTTCTAC
GGGGCGTGCG CCTCCTTCCC CGAGCTCGTC GAGGTCCTGC AGGTCAATCA GGTGGTGGTC
GGGCCTATGG CGGCCGCCGA CATCCGCGAG ATCGTGGTGA ATCCGGCTCG TGCCGCGGGT
GGGGACGTTG AGCCCGGGCT CGTCGAGCTC GTCCTGCGCG ATCTCGGCGC CGCCGCTGGC
ACGGGGATCA CCGGAAGCGA CCAGGGCACC GGCCACGGCA GCAGTCGCAG CCCCGAGCTC
GTCTCCAACC TCAGCTCCGG GTTCGTGGCT GATCCGGGCT CGCTGCCACT GCTCGCCCAC
GCGCTGCGCG CGACCTGGTT CGCCCGTGCG GGCGAGGCGC TCACCGTCGC CGATTATCTG
CGCGTCGGCG GGCTGACCGG GGCCATCGCC CAGACCGCCG AGGCGGCCTA CACGAGTCTG
GACGGGGCCG CCCAGCAGGC CGTCCGACCA CTACTGATGC GCATGATCCG GCTTGGTGAG
AACGGCGCGG ACACCCGGCG GCGGGTACGG CGGGCGGCGC TGCTCGCGGA GGTGCCGGGG
CCGGAGTCGG CGACCGTCCT GGATGCGCTG GTAGCCGCGC GTCTCGTCGA GGCCGATGCC
GATGGGGATC AGGACGGTCT GCAGATCGCG CACGAGGCGT TGCTGCGTTC CTGGCCACGG
CTGCGCGAGT GGATGGACAT GGACCGCGCC GGCGCCGTGG CGTTGCAGCA GCTGCGCGAC
GCCGCTGAGG TGTGGGAGCG GGGCGGGCGG GATCCGTCCT ACCTTTTCGC CGGTTCGCGT
CTCGCCGCGG CCCGCGACTG GATGGACGAC GACCTGGACG TCGATGCGAC GACCAGGCAG
TTCTTCGACG AGAGTGTCCG CGCAGAGGCC GAGCAGCAGC GGGCGGCGGC GCGCCGGACC
CGTAGGCTGC GCCAGCTCGT GGCGGCGCTG GCCGTCCTGC TGCTCGTCGC CGCGTCGCTG
GCGGGCCTGA CGTTCCAGCA GAGCGCCTCG TCGGGGCGGG CTCGGGACCA GGCGCTCTCG
CAGCGGATCG CGACGCAGGC GGAGGCTGCC AGGCGTAACA ATCCGGCGCT GGCCGCCCAG
CTCAGCCTGG TCGCGCTGCG CACGGCGGAC ACGCCGGAGG CACGCGGGGC CGTCCTGTCG
TCGTTCAACG GCGGTAGCGG GGTGCCGACT CGGTACCAGG CGCATACCAA GTCGGTCGGG
ACGGTCGCCT ACAGCAGGGA CGGCCGCCTG CTCGCGACGG GCAGCGACGA CTGGACAGCC
GCGGTCTGGG ACGCGGCCGA TCCGCGGCGG CTCACGCCAC TCGCACGCAT CCCGGACGAA
CGCGGTGGCG GGCATGGCAG GGCGGTGAAG GCGGTGGCCT TCAGCCGGGA CGGGACGGTG
CTGGCGACCG GCGGCGCCGA CGGCCTGGCC AAGCTGTGGA ACATCACCGA CCGGGCCCGA
CCGCGCCTGC TGGCGACCCT GCCGAAGGCG GATTCGGAGG TCTACGGCCT GGCGTTCGAT
CCGACGTCTG ATCGTCTCGC CGTCGGTGGT TACGGCAAGT CGGCGTACAT CTACGACGTC
TCCGATCCGG CGCGCCCGGA GAAGAAGGGG CAGCTCTTCC TGCACCTGGC GCAGGTGGTG
GCGCTGGAGT TCAGCCCGGA CGGCGCGTTC CTGATCGCCG GGGACGAGGG CGGTTCCGCC
CTGTTGTGGT CGGTCAGTGA TCCGAGCAAC CCGAGGCCGC TCAAGGTTCT CGTCGAGGAC
GGCGGCCCGA GCTCGGACGG CGCGGGCGCG ATCCGGTCGA TCACCTTCGG CGGCGACGGC
CACACGGTCT ACACCGCCGG GGACGGCGGC TACGTCCGCA AGTTCTCCGG GCCGGACCTG
CCGCGTCTGG AGTACGACGG CCGGGCGGGG ACCGGGGACG CGCCGATGAC CGGCCTCGCC
GTGGACCCGG TCAGCGGCCT GGTCGGCGTG GGCGGGTTCC GGTACGTCGG AGTTCCGATT
TTCGATGTGG ACGTCGACCA GTACAGCCTG ACCTTCCTCG ACGAGGGCGC CACGGTCTGG
GATGTGGCCT TCAGCCCGGA CGGCCGCCGG CTCGCGTCGG TCTCGGTGGA CGGCTCGCTG
CGGGTCTGGG AGATGCCCGG CCCGGCGCTG ATCGGGCGCA ACGGCGCGCA GGAGGACGCC
GTCGTCAACC CGGTCACCGG CATCGTAGCG ATCACCACCG ACAAGGCGGT CGAGCTGTGG
GACGTCGATG ATCCTTACGC GCCCCGCCGA CTGCACGTGC TCACCGACGT GATCGTGGAC
GAGTACGACC CGACGGGCTC GTCGGCCTTC AGCCCGGACG GGAACGTGCT CGCGGTGGGC
ACGGGCAAGA ACATCGTCTT CTACGACGTC CGCGACCCTG CGAAGCCGTC CCGGATCTCG
GACGTGCCGG GGCCGGCCGG GGGCACCGCG GAGCTGTTGT TCAGCCCGGA CGGGAGGACC
CTGGCGCTCG GCGGCCTGAA CTCCCCGCCG GAGCCGGCAT TCCAGGCCAG GGTCGAGACC
TGGGACGTCA CCGATCTCTC CCGGCCGCGG CGGCTCGCGT CGCTGATCGC GCACCGCTCA
TCCGTCCGTG ACCTGACCTT CTCACCGGAC GGCCGGACCC TGGTGAGCGC GGCCGAACGA
TCGGTGAAGC TCTGGGATGT GACGGACCCG CGACGGCTCC GGCTGGTCTC GGAGCTGCCC
GAGTTCCCCG GCGGGGTCTG GGAGGTGCGC TTCTCCCCCG ATGGCAGGAC GCTCGCGGCC
GGCGGGGCCA ACCCGTTCGC GACGCTGTGG GACGTGACCC GCATGGACGC GCCGCGCCAG
ATCGCGGACC TGCCGGGCCA TTCGGCGTCC GTGACCAGCG TCGCGTTCAG CCCGGACGGC
ACGCAGCTCG CCACTGGCAG CAACGACAAC ACCGTACGGA TATGGGACGT TACGGAACAC
GACTCCCCGA CGCTCATCGA GAAGCTCGCA CGCTCGGCGG GCAGCGAGGC CGGTATCGAG
GAGATCCTCT ATACCCGGGA CGGCGAGAAG CTGGTCGGCG TGATCTTCAC CGTGCCCGCG
GTGGTGTGGG ACCTCGATGT CAACCGGGTG CGGGCCCGGA TCTGCGAGCG GGCGGGCGTG
GGCATCACGG CCGCGGAGTG GCGCCGTTTC CTACCGGATC TGCCCTACGA TCCGGTCTGT
GACTGA
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| Protein sequence | MTSERSERGG PHGSGEDSPG AAARPDQRTS RTVAGNAAEM RTPPLVESQA APTQIIDGYP
SKPPTSVPPA GAYSTACPYP GLRGFDESSE QWFFGRERMV ADLVARVSSE ASRVGPLVLV
GASGSGKSSL LRAGLLPALA RGALPGSRGW PRLVMTPGEH PLEALVQRVV EATGMPTMAR
MLGDSLRREP ERLSEIVREL LAARATPRSA PEGGETTIRR GPRNDATTLY RPGNPHEPAD
PREPRESAAP HEPRELSASR APLKPAVPHE PPTPRKAHEP RKAHEPHAPH EPRMVIAVDQ
FEEVFTLCAD QAEREAFVRA LCATAAGSAV VVIGLRADFY GACASFPELV EVLQVNQVVV
GPMAAADIRE IVVNPARAAG GDVEPGLVEL VLRDLGAAAG TGITGSDQGT GHGSSRSPEL
VSNLSSGFVA DPGSLPLLAH ALRATWFARA GEALTVADYL RVGGLTGAIA QTAEAAYTSL
DGAAQQAVRP LLMRMIRLGE NGADTRRRVR RAALLAEVPG PESATVLDAL VAARLVEADA
DGDQDGLQIA HEALLRSWPR LREWMDMDRA GAVALQQLRD AAEVWERGGR DPSYLFAGSR
LAAARDWMDD DLDVDATTRQ FFDESVRAEA EQQRAAARRT RRLRQLVAAL AVLLLVAASL
AGLTFQQSAS SGRARDQALS QRIATQAEAA RRNNPALAAQ LSLVALRTAD TPEARGAVLS
SFNGGSGVPT RYQAHTKSVG TVAYSRDGRL LATGSDDWTA AVWDAADPRR LTPLARIPDE
RGGGHGRAVK AVAFSRDGTV LATGGADGLA KLWNITDRAR PRLLATLPKA DSEVYGLAFD
PTSDRLAVGG YGKSAYIYDV SDPARPEKKG QLFLHLAQVV ALEFSPDGAF LIAGDEGGSA
LLWSVSDPSN PRPLKVLVED GGPSSDGAGA IRSITFGGDG HTVYTAGDGG YVRKFSGPDL
PRLEYDGRAG TGDAPMTGLA VDPVSGLVGV GGFRYVGVPI FDVDVDQYSL TFLDEGATVW
DVAFSPDGRR LASVSVDGSL RVWEMPGPAL IGRNGAQEDA VVNPVTGIVA ITTDKAVELW
DVDDPYAPRR LHVLTDVIVD EYDPTGSSAF SPDGNVLAVG TGKNIVFYDV RDPAKPSRIS
DVPGPAGGTA ELLFSPDGRT LALGGLNSPP EPAFQARVET WDVTDLSRPR RLASLIAHRS
SVRDLTFSPD GRTLVSAAER SVKLWDVTDP RRLRLVSELP EFPGGVWEVR FSPDGRTLAA
GGANPFATLW DVTRMDAPRQ IADLPGHSAS VTSVAFSPDG TQLATGSNDN TVRIWDVTEH
DSPTLIEKLA RSAGSEAGIE EILYTRDGEK LVGVIFTVPA VVWDLDVNRV RARICERAGV
GITAAEWRRF LPDLPYDPVC D
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