Gene Franean1_7111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7111 
Symbol 
ID5675416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8681652 
End bp8682059 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content69% 
IMG OID641245949 
Productputative transposase 
Protein accessionYP_001511340 
Protein GI158318832 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.752009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTACCTG CGGTACGCGC TGTCCTACCG GGACGTCGAG GAACTGCTCG CCCCGAACGG 
GGCATCGCTG TCGATCACGT CACCGTGTAC CGATGGGTGG CGCGGTTCAC CCCGCTTCTG
ATTGACGCGG CCCGGCCCTG CCGGCACACG CCTGGGGACC GGTGGTTCGT CGACGAGACG
TATGTGAAGG TCGCCGGCCG GTGGACCTAC GTGTACCGGG CGGTCGACCA GTACGGCCAG
GTCATCGATG TTCTCGCCAG CGAACGGCGC GACCTGGCTG CGGCCCGCCG GTTCTTCACC
ACCGCGCTGG CCCACGGTCG CCGCCCGGTT GAGGTCACCA CCGATAAGGC GGCGTCCTAC
CCGCGTGTTC TCGACGAGCT GCTGCCCGAG GCGTGCCACG TCGAGTAA
 
Protein sequence
MVPAVRAVLP GRRGTARPER GIAVDHVTVY RWVARFTPLL IDAARPCRHT PGDRWFVDET 
YVKVAGRWTY VYRAVDQYGQ VIDVLASERR DLAAARRFFT TALAHGRRPV EVTTDKAASY
PRVLDELLPE ACHVE