Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7101 |
Symbol | |
ID | 5675410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8669977 |
End bp | 8671467 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641245944 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001511335 |
Protein GI | 158318827 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGTCA TCTTGCCTTG GCTGCCCGGG TTCCCTGTCG CCGTCTACTG CGTCCGCAGT AGACGGCGGT ACTTTGGGGC AGGTTCGACG GCAGGAATCG CATTCCCTCG GTACTGTGGG TTCGTGTTCG GCTGGTTCTC ACGGTTTCGG GATGTCTGCC AGGGCGGCCT GCGGCGGCGT CCGAGTCTGG CTGACGTTCT TGTCGCGCTC GTGACCTTCG GCCTGGGAGT CCTGATCGCC ACCCAGACCG CGACCGGTCA CTCCTGGTCG AGCGGGCTCT ATCTGGTCAC AGGTGCGATC AGTTGCGCTG CGCTGGTGGC CCGCCGGTGC AGGCCGCTGG TGGTCCTCGG ATTCGTCCTT GGGTGGTCTT CCCTCGTGGC CGTCGTCGTT GGCAGGCAGG GTGACGGGCC GTCGCTGATC GCGATCTGGG TCGCGCTGTA CAGCGTCGCG GCGTACCGGC CGCGGAAGAC CGCGTGGATC GCCGCGTCGG GCACCATCGC TTTACTACTG CCGCCTGCGC TGACGCGCGA CGACGCGGTC ATCCAGGCCG TCGCGGGGGC GTTCCTGTGG GTCGTCACCG TGACCTCCGC GGGCTGCTCG GTGCGTGATC GCAGGGCCTA TCAGGCGGCG GTGGAGGACC GGGCGCTGCG CGCCGAGCAG AGCCGCGAGC AGGAAGCCTG GCGCCGGGTG GTCGAGGAAC GGACGCGGAT CGCCCGGGAG TTGCACGACG TTGTCGCCCA CCACATCACT CTCGTCAAGT CGCAGGCGGC CGTCGCCTCG CATCTGCTGT ACGAGCAGCC GGCCAAGGCG GACGAGGCGC TGGCACACAT CCGCCTGTCC AGCCGCACCG TCCTGAACGA GCTGGGGTCG TTGGTGAGCG TGCTGCGCGA CACCCCCGAG TCGACATCCA CCGAGCCGCC TCCAGGGCTG GCCCGGCTTC CAGAGCTGAT CTCCGCCTTT CAAGCGATCG GCATGACGGT GTCCTGCACC GTGACCGCGG CGGGATCCGG GTTGCCCCCA CTGGTGGATC TCGCCACCTA TCGGATCGTG CAGGAGTCGC TGACGAACAT CCGCAGGCAC GCTCCCGATG CCCGGACGTC GGTCCAGGTC GACCGTTTCC GCACCGAAGT GCGCCTGCGC ATCCACAACA CGAGGCCCGG CGGCGTCGCA CCTACCGTCG GCTACTCACG CCTCATGACC CCCGGCTGGG ACGGGACGGC GGAAACGGGA CGCACTCCAG GTGGCCACGG TATCGCGGGG ATGCGAGAAA GAGCGCGGAC CGTCGGTGGC TGGCTGGACG CCGGTCCCGA CGCGGAGGGG GGCTTCGCTG TCACCGCGAT GTTGCCGGTC CCGAAGGAGG CGTCCGCCTC CTCACCACCA TCCGCCGCAC CATCGCCACC GAGCTCGACG TGGTCACCGA TGGTGCCACC CCCCACCGCG CCGTCGATGT CGGCCCCCGC ACCCGTCGCT CCCAGCCACG CACCGTCGTA G
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Protein sequence | MTVILPWLPG FPVAVYCVRS RRRYFGAGST AGIAFPRYCG FVFGWFSRFR DVCQGGLRRR PSLADVLVAL VTFGLGVLIA TQTATGHSWS SGLYLVTGAI SCAALVARRC RPLVVLGFVL GWSSLVAVVV GRQGDGPSLI AIWVALYSVA AYRPRKTAWI AASGTIALLL PPALTRDDAV IQAVAGAFLW VVTVTSAGCS VRDRRAYQAA VEDRALRAEQ SREQEAWRRV VEERTRIARE LHDVVAHHIT LVKSQAAVAS HLLYEQPAKA DEALAHIRLS SRTVLNELGS LVSVLRDTPE STSTEPPPGL ARLPELISAF QAIGMTVSCT VTAAGSGLPP LVDLATYRIV QESLTNIRRH APDARTSVQV DRFRTEVRLR IHNTRPGGVA PTVGYSRLMT PGWDGTAETG RTPGGHGIAG MRERARTVGG WLDAGPDAEG GFAVTAMLPV PKEASASSPP SAAPSPPSST WSPMVPPPTA PSMSAPAPVA PSHAPS
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