Gene Franean1_7088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7088 
Symbol 
ID5675398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8657126 
End bp8657683 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content61% 
IMG OID641245933 
Producthypothetical protein 
Protein accessionYP_001511324 
Protein GI158318816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCG AGGACGAGCT CAAGGAACTT CGCCGCGAGC TCCGGTACGT CACGGACCGT 
CTCGCGATTC TCGACTGCGT CATGAAGCAG TCACGCGGTC ACGACCGCCA TGACATCGAG
CTTATGGCAA GCGTCTACCA CAACGATGGA GTCGACGAGC ACGGACCCGT CGTGAAGCTC
GGCCCCGACT ACGGCGAGTA CGCCAACCAG GCTCACTCGT CGGTTTTTGT CGATCACTTG
CACAATATCA CGACCCACAC CTGCGAGATC GACGGCGACG AGGCTCACTG CGAAAGCTAC
GTCATCGGTG CTATGCGTTC CCGCGACGGC AAGACCGTGC ACATCTTCGG AGGAAGATAC
CTCGATCGCG TCGAGCGGCG GGACGGCGTG TGGAGGATCG CGTTGCGGCG GTGCACCCTC
GAGTGGACGA TGAACGGCGA CACGTCACTC CTTTCCTCCG GTTCGTTCAC AGGCTTCATC
AAGGGAACGT GGGACAAGAA CGATCCGTCG TATGCGCGGC CCTTGGACCT GGAGAAGACC
CCGGTCAAGA AGTGGTGA
 
Protein sequence
MSVEDELKEL RRELRYVTDR LAILDCVMKQ SRGHDRHDIE LMASVYHNDG VDEHGPVVKL 
GPDYGEYANQ AHSSVFVDHL HNITTHTCEI DGDEAHCESY VIGAMRSRDG KTVHIFGGRY
LDRVERRDGV WRIALRRCTL EWTMNGDTSL LSSGSFTGFI KGTWDKNDPS YARPLDLEKT
PVKKW