| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7074 |
|---|
| Symbol | |
|---|
| ID | 5675384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 8633198 |
|---|
| End bp | 8634148 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641245919 |
|---|
| Product | ribokinase-like domain-containing protein |
|---|
| Protein accession | YP_001511310 |
|---|
| Protein GI | 158318802 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1105] Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) |
|---|
| TIGRFAM ID | [TIGR03168] hexose kinase, 1-phosphofructokinase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTCA CGGTGACGCT GAATCCCAGC CTCGATCGCA CAATCGACAT CAGCGCGCTG
GCGCGTGGCG CCGTCATCCG GGCGGCGTCG GCCCGGCTGG ATCCGGCCGG TAAGGGTGTC
AACGTGGCCC GGGCGCTGCT GGCCAACGGG AAGCGGTCGC GCGCGGTGCT GTCGTGCGGC
GGTGACGATG GCCAGCGACT GGTCAGGATG CTCGCCGCGG AGGGCGTCGA CATGCTGGCG
GTGCCGATCG CCGGATCGAC CCGGTCGAAC ATCACGTTGT CGGAGCCGGA CGGCACCGTC
ACCAAGATCA ACGAGCTGGG TCCGTCGCTG TCCAAGGACG AGCTGGACAC GGTCGCCGCC
GCCGTGCTCG ACTGCGACGT GCCGGGGGGA TGGGTCGCGG TGTGCGGCAG CCTTCCGCCT
GGGGTGCCGG CGGATGCGTA CGCGGACCTG TGCGTCCGGT TCCGCGCCGC GGGCCGAAGG
GTCGCGGTCG ACACCAGCGG TGCGGCGCTC CTCGACGCGG TCGCCGCGGG GCCGGCGGTG
GTGAAGCCCA ACCAGGAGGA GCTTGGTGAG GCGGTCGGCG CGCCGCTGCG CAACCTGGGT
GAGGTGATTG AGGCGGCGCA GCAGCTTCGG ACCTGGGGGG CCGGCGCGGT CCTGGCCAGC
CTGGGTGCGC ACGGTGCGGT GCTTGTCGAT GACCACGGCG CGGTGATGGG GGATTCTCCC
GTGCTCGGCC CGCGCAGCAC CGTGGGCGCC GGGGACGCCC TCCTAGCAGG GTTCCTCGCG
GCCGGTGCTC GCGGGCCCGA GGCCTTGGCG GAAGCCTTGG CCTGGGGCGC CGCCGCCGTT
AGCCTGCCGG GTAGCCGGAT GCCCCGGGCC GAAGACATAC GCCGGGATCG GGTCCGTATC
CATAACCGCC CCGATTTCCA CCGGGCCATG ACCCTGCCGC TGCCCGCCTG A
|
|---|
| Protein sequence | MIVTVTLNPS LDRTIDISAL ARGAVIRAAS ARLDPAGKGV NVARALLANG KRSRAVLSCG
GDDGQRLVRM LAAEGVDMLA VPIAGSTRSN ITLSEPDGTV TKINELGPSL SKDELDTVAA
AVLDCDVPGG WVAVCGSLPP GVPADAYADL CVRFRAAGRR VAVDTSGAAL LDAVAAGPAV
VKPNQEELGE AVGAPLRNLG EVIEAAQQLR TWGAGAVLAS LGAHGAVLVD DHGAVMGDSP
VLGPRSTVGA GDALLAGFLA AGARGPEALA EALAWGAAAV SLPGSRMPRA EDIRRDRVRI
HNRPDFHRAM TLPLPA
|
|---|
| |