Gene Franean1_7071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7071 
Symbol 
ID5675381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8631089 
End bp8631583 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content72% 
IMG OID641245916 
Productphosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 
Protein accessionYP_001511307 
Protein GI158318799 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGG GACACGGTGC GGCGCGGCAG GACAGCCCCG GCGGCACCAT GAGCCGGCTG 
CTCGACCCGA GCGCGGTGCG CCTCGCCGAG GTGGCAGCGA GCCGGGAGGA TGCGATCCGC
GGCTGCGGTC GCGCGCTGGT CGACGTCGGA GCGGTCGTCC CGTCCTACAT CGACGCCATG
CTCGAGCGGG AGCGGACCAT CTCCACCTAT GTCGGCGAGG GGGTGGCGAT CCCGCACGGC
ACCTTCGCCG GCAAGGAGCT GGTCCACCGG GACGCACTGG CGTTCCTGCG ATTCCCGGAC
GGCGTCGACT GGGACGGCGA AACGGTCCGG GTCTGTGTCG GCATCGCCGC CCGGGGCGAC
GGCCATGTGG CGCTGCTGTC CGAACTGGCC ATGATCCTGC TCGACCCGGA CCGCGCCCGG
GCGTTGCGCG AGGCAAGCGA CGTCGACGAC GTCATCCGGC TACTCCAGCC GGCTACCGGA
GAGGACTCCG CATGA
 
Protein sequence
MSEGHGAARQ DSPGGTMSRL LDPSAVRLAE VAASREDAIR GCGRALVDVG AVVPSYIDAM 
LERERTISTY VGEGVAIPHG TFAGKELVHR DALAFLRFPD GVDWDGETVR VCVGIAARGD
GHVALLSELA MILLDPDRAR ALREASDVDD VIRLLQPATG EDSA