Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7069 |
Symbol | |
ID | 5675379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8627887 |
End bp | 8629962 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641245914 |
Product | phosphoenolpyruvate-protein phosphotransferase |
Protein accession | YP_001511305 |
Protein GI | 158318797 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [COG1925] Phosphotransferase system, HPr-related proteins |
TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTGTA GGACGGCGAC CGTGAATTCC CGCGGCGGGT TACACGCCCG CCCCGCAGCG CTCTTCGTCC GGGCCGCCGC GCAGCAGGCG GTCCCGGTTC GGATCCGCAA GGGCGACGGC CCGGCCGTGA ACGCCGCCAG CATGCTGTCG GTGCTGGCCC TGGGCGCGAT GTACGGAACG GTCGTGACGC TGGAAGCGGA CGGTGAGCGG GCCGAGGAGG CGCTCGATGC TCTCGCCGCG ATCCTTGCCC ACGACCAGGA CGCCGCCGAC AGCGGGCAAG GAGACGGGCG GGTCGGGAGC GCCAGCGCGT CCGACAAGGC GTTAGACGAG ACGGGCGGGA CCGGCAGGAG CCGGGCGACG GCTGACGTCT TCGTCGGACT CGGTGTCAGC CCCGGGCTGG TCACCGGTCC CGCCTTCCGG ATGGCGCGTC AACCCCGGCT GCCCGACCCG CGCCTCGTCC TCGATCCCGA CGAGGAGGCC GCTGCCGCCG CGCGGGTACT CCGGAACGTG GCCTCCGACC TGCGGGCCCA CGCAGCGGCG ACCCGGCTCT CCGCTGCCTC GGACATTGTG ACGGCACAGG CGATGATGGC GGAAGACCCG GTGCTCCTCG ACGAGGTCGG CATGCGGGTC CGGTCGGGTC TGGACGCCGT GCACGCGATC GATGCCGCAC TTGCCGACCA GCGCCGTCAG CTGGAAGGAG CTGGCGGCTA CCACGCCGAG CGGGCCGCCG ACATCGACGA CATCCGGCAT CGTGCCGTCG CGGCTCTGCT CGGCCTGCCC GCGCCCGGCC TCCCCGCGCC CGGGTTCCCG TTCGTCCTGG TGGCCGAGGA CCTCGCACCC GCCGACACCG CCACCCTCGA CACCGATCTT GTCCTGGCCC TGGTGACCGA GCGTGGCGGT CCCACCAGCC ACACCGCCAT CCTCGCCCGT GCCCTCGGGC TCCCCGCCGT CGTGTCCTGC CCAGGCGCGA TGGCCCTCGA CGACGGGACC CCTGTCCGGG TCGACGGCAC CACCGGCGAG GTCCACGTCG GGGTCGGGGT CGATGTGGAG GCCGACGGCG CGGGCCACGG CGAGGCCATC GCGCAGGACA CGGCCGATGT CCGCCAGCCC GGCTTGTGGC GGACGACGTC GCGGGCCGCG AAGGCCGGCC CGGCCCGGGG TGGTCCGGGA CGCACCGCGG ACGGCCGCCC GGTCCAGCTG CTCCTCAACA TCGGCTCCGC CAAGGACCTG CGCGGCGACG TCGCCGCCAC GGCGGAGGGC GTGGGCCTGT TCCGCACCGA GTTCCTCTTC CTCAACCGGC GGGTCGCCCC CACTCCTGAC GAGCAACGGG ACGCCTACCA GGCCGTCTTC CGTGCAGCCG GCAGCAGGAA GGTCGTCGTC CGCACGCTGG ACGCCGGCGC CGACAAGCCG CTGCCCTTCC TGAGCCTGCC TGACGAGCCC AACCCGGCGC TCGGCGTGCG GGGCTACCGG ACGGTCTGGC TGCGCCCCGA GGTACTCGAC ACCCAACTGG GCGCGATCGC GGACGCCGCG GCTGCGTGCG ATGCGGACGT CTGGGTGATG GCGCCCATGG TTTCGACGCC CCCGGAGGCG GAGGCGTTCG CGGCGGCCGC TCGCGGGCAC GGGCTGGCAA CGACTGGCGT CATGGTCGAG GTGCCTGCGG CGGCCCTGCG AGCTGGCCGG ATGCTGGACA CCGTCGACTT CCTCAGCGTC GGAACCAACG ACCTGGGCCA GTACACGCTC GCCGCCGACA GACAGAGCGG TCACCTCGCG GACCTGCTCA GCCCCTGGCA ACCTGCGTTG CTCCGCCTCG TGGCGGACTG CGCGGCCGCC GGGGAAGCAT CCGGCAAGCC AGTCGGGGTG TGCGGCGAGG CCGCGGCCGA CCCCCTGCTC GCCGCCGTCC TGGTCGGGCT CGGAGTCACC AGCCTGTCCA TGTCAGGGCG GTCCATTGCG GCTGTCCGCG ACTCCCTTGC CGCACACACG ATCAAGGAGT GCCGGGCGCT GGCAGAGATT GTGATCGACG CGGACGATGC GGAGCGCGCC CGCGAGCTGG CGACGAAGAA CGCGCGGCAG ACGTAA
|
Protein sequence | MACRTATVNS RGGLHARPAA LFVRAAAQQA VPVRIRKGDG PAVNAASMLS VLALGAMYGT VVTLEADGER AEEALDALAA ILAHDQDAAD SGQGDGRVGS ASASDKALDE TGGTGRSRAT ADVFVGLGVS PGLVTGPAFR MARQPRLPDP RLVLDPDEEA AAAARVLRNV ASDLRAHAAA TRLSAASDIV TAQAMMAEDP VLLDEVGMRV RSGLDAVHAI DAALADQRRQ LEGAGGYHAE RAADIDDIRH RAVAALLGLP APGLPAPGFP FVLVAEDLAP ADTATLDTDL VLALVTERGG PTSHTAILAR ALGLPAVVSC PGAMALDDGT PVRVDGTTGE VHVGVGVDVE ADGAGHGEAI AQDTADVRQP GLWRTTSRAA KAGPARGGPG RTADGRPVQL LLNIGSAKDL RGDVAATAEG VGLFRTEFLF LNRRVAPTPD EQRDAYQAVF RAAGSRKVVV RTLDAGADKP LPFLSLPDEP NPALGVRGYR TVWLRPEVLD TQLGAIADAA AACDADVWVM APMVSTPPEA EAFAAAARGH GLATTGVMVE VPAAALRAGR MLDTVDFLSV GTNDLGQYTL AADRQSGHLA DLLSPWQPAL LRLVADCAAA GEASGKPVGV CGEAAADPLL AAVLVGLGVT SLSMSGRSIA AVRDSLAAHT IKECRALAEI VIDADDAERA RELATKNARQ T
|
| |