Gene Franean1_7022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7022 
Symbol 
ID5675333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8564402 
End bp8565946 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content59% 
IMG OID641245868 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_001511259 
Protein GI158318751 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.533798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACC TCACTCACGC ACAGTGCGAC AACCCGCACG GCAGGTTCAT TTCGATAGGA 
GAACCCATGC CGCAGCTTAT GTCGGTTGCC CCCTGCGAGA TAGTAGTCTT CGGCGGCACA
GGGGATCTGG CGATGCGCAA ACTGATGCCA GCGCTGTACC ACCGCGACCG AGACGGGCAA
CTCACCCCCG ACTCGCGGGT CATTGCCGTG TCCCGGGCCG GACTCGATGA TGCCGGATAC
CGCGACAAAG TTGATTCTGA ACTGCGCCGG TTCGTCCCGG AGCTAATACA CGAGCCGGAT
GTCCTAGCTC GCTTTATCCA ACGCCTGCAC CACATCACGG TCGACGTGGC GGAGCACAGC
ACCTGGGATG AACTGCGGAC ACTTCTGGCG GACGGAAAAG ACCATGTGCG CGTCTTCTAC
CTTGCCTGTG CCCCACAACT GTTCGGGCCA ACCTGTGTAG GCTTGCAAAC CAACGGATTA
GTGACCGATA ACTCCAGGGT GGTCCTCGAG AAGCCACTTG GGCATGATCT GGTCTCCGCG
CGCCGGATTA ACGATGAAGT CGGTGCGGTT TTTGCTGAGG AACAGATATT CCGTATCGAC
CACTACCTCG GTAAAGAAAC CGTCCAGAAC CTCCTTGTGC TACGCTTCGC CAACTCCCTT
CTTGAGCCGC TGTGGAATTC TGGTGCGATC GACCATGTAC AGATTACGGT CGCAGAAACA
ATTGGCATCG GAGGGCGCGG CGACTATTAC GATGGCTCGG GTGCCATACG TGACATGGTA
CAGAATCACC TTCTGCAACT GCTCTGTCTG GTGGCGATGG AACCACCCAG CCGACTTGAC
CGCGAGGCGG TCCGCGACGA GAAGCTAAAG ATTCTCCAGG CCCTATCCCC ACTGACACTC
GGTGACGTGG AACGGTGCGT CGTCCGAGGA CAGTACACGG CCGGACTCGT AGAGGGAGCT
CCAGTTCCTT CTTACCAGGA CGAAGTTGAT GGGAGCACGA GTACCACCGA GACGTTTGTG
GCGCTGAAGG TCGAGGTCCA GAACTGGCGC TGGTCCGGGG TACCCTTCTA CCTGCGTACC
GGCAAGAGGC TAGATCGTCA TGCATCGGAG ATCGTGGTTC AGTTCCGACC GGTACCACAT
TCAATCTTCC CGGGTATCAA GGATGCGATT TCTCCTAACG CTCTTGTGCT GCGGCTGCAA
CCTGACGAGG GCGTACGCCT CCACTTGATG GCCAAAGAAC CGGGCCCGGG CGGCGTGCGA
CTGCGTCCAG TCCACCTCAA CCTCAGCTTC GCCGAGACTT TCAAGTCACG CCTGCCCGAT
GCCTACGAGC GGCTACTCAT GGACGTCGTT CGTGGCAACC CGACGTTGTT CATGCGACGC
GACGAGGTCG AGGCCGCATG GGCGTGGGTG GAGCCCATCC TGGCCGCTCT GGCGGCGTCA
ATTGACTCAC CGAGGCGCTA CGCAGCTGGC ACTGGTGGAC CTGCTGCAGC GATCGCATTG
ATCGAACGTG ACGGCCGCAC GTGGCATGAG GAGGTAGCAG AATGA
 
Protein sequence
MQNLTHAQCD NPHGRFISIG EPMPQLMSVA PCEIVVFGGT GDLAMRKLMP ALYHRDRDGQ 
LTPDSRVIAV SRAGLDDAGY RDKVDSELRR FVPELIHEPD VLARFIQRLH HITVDVAEHS
TWDELRTLLA DGKDHVRVFY LACAPQLFGP TCVGLQTNGL VTDNSRVVLE KPLGHDLVSA
RRINDEVGAV FAEEQIFRID HYLGKETVQN LLVLRFANSL LEPLWNSGAI DHVQITVAET
IGIGGRGDYY DGSGAIRDMV QNHLLQLLCL VAMEPPSRLD REAVRDEKLK ILQALSPLTL
GDVERCVVRG QYTAGLVEGA PVPSYQDEVD GSTSTTETFV ALKVEVQNWR WSGVPFYLRT
GKRLDRHASE IVVQFRPVPH SIFPGIKDAI SPNALVLRLQ PDEGVRLHLM AKEPGPGGVR
LRPVHLNLSF AETFKSRLPD AYERLLMDVV RGNPTLFMRR DEVEAAWAWV EPILAALAAS
IDSPRRYAAG TGGPAAAIAL IERDGRTWHE EVAE