| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6975 |
|---|
| Symbol | |
|---|
| ID | 5675287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 8499827 |
|---|
| End bp | 8500900 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641245823 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_001511214 |
|---|
| Protein GI | 158318706 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTCG GAAGAATCCT GTTGGATGCC GCGGCGTCGT TGACCACGCC ACTGCTGCCC
GATGATTACC TCGGACTGAT TGATCCGCTC TGGTCGCGGC GCGGGTTGCG GGGGCGGGTC
GAGACTGTCC GGCGGGAGGC CGCCGGCGTC GCCACGCTGG TGATCCGTCC CGGCGCGGGC
TGGAACGAGC ATCGCGCGGG TCAGTACGTC CGGATCGGCG TGAATGTCGA CGGAGTGTGG
CACTGGCGCC CCTACTCGGT GTCCTCGGCC CCGGGGGATC CCGGCGGTGT CATCTCGATC
ACGGTCAAGG CCCTCCCGGA CGGGAAGCTG TCCGGTCGTC TCGTGGAACG GGTCCGGCCT
GGCGCGATTG TGCGCCTGGA GAAACCACGG GGGTGTTTCG TGCTGCCGCA GGTGCTTCCG
TCGCGGCTGC TGTTCGTGAC CGCTGGCAGC GGCATCACGC CGGTGATGTC GATGCTGCGC
GGCTTTGCGC AGGATGGCGA GATGCCGGAC GCGGTCGTCG TGCATTCGGC GCCGACGCGG
GACGATGTCA TCTTCGGCAC CGAGCTACGA GAGCTCGCGG CCCGGTTCCC CACCCTTCGG
CTTCACGAGC ACCACACCAG GGTGCCCGGC GGGCCCGCCC GGCGTCTCAC CATGGCGGCG
CTGCCCGCGA TCTGCCCGGA CTGGGCGGAA CGGCCGGCCT GGGTCTGCGG ACCCCCAGGG
ATGCTCGCGG ACGCCGAGGC CTGGTGGCGT CGGGCGGGGA TCGCGGACCG CCTGAGGGTG
GAGCGGTTCC GTCCCGCCGG GGCGCCCGGT GGCGGGACCG GAGGGCGGGT CCGGTTCGCC
AGGAGTGGCC GGCAGGCTCA GGCTGGCGGC AACAAATCGC TGCTGGCGGT GGGTGAGGAC
GCCGGCGTCC TCATGCCGAG CGGCTGTCGC ATGGGTATCT GCCACAGCTG TCTGGCCCAG
CTCACCTCGG GCCGGGTGCG GGACCTGCGC ACCGGGCGGG AGCACGGTGC GCAGGGCGAA
CTCGTCCAGA CCTGCGTGTC GGGCGCGGCC GGCGACGTCG AGATCGACCT TTGA
|
|---|
| Protein sequence | MTVGRILLDA AASLTTPLLP DDYLGLIDPL WSRRGLRGRV ETVRREAAGV ATLVIRPGAG
WNEHRAGQYV RIGVNVDGVW HWRPYSVSSA PGDPGGVISI TVKALPDGKL SGRLVERVRP
GAIVRLEKPR GCFVLPQVLP SRLLFVTAGS GITPVMSMLR GFAQDGEMPD AVVVHSAPTR
DDVIFGTELR ELAARFPTLR LHEHHTRVPG GPARRLTMAA LPAICPDWAE RPAWVCGPPG
MLADAEAWWR RAGIADRLRV ERFRPAGAPG GGTGGRVRFA RSGRQAQAGG NKSLLAVGED
AGVLMPSGCR MGICHSCLAQ LTSGRVRDLR TGREHGAQGE LVQTCVSGAA GDVEIDL
|
|---|
| |