| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6937 |
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| Symbol | |
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| ID | 5675250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8451033 |
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| End bp | 8452775 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641245786 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_001511177 |
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| Protein GI | 158318669 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.399913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCCCA CGGTGGCCCG TCTCGAACTC GACGACCTGC TCAGCCAACT CGTCGACCGC
GCCCAGGACG TTCTCGCCAC CCAGGGCCGG CTGCGCGGCC TGCTGCACGC GAACCGGGTC
ATCGCCACCG ACCTGCGACT GCCTGTCCTA CTCCGGCACA TCGTCGAGGC CGCAACGGAT
CTGCTGGGTG CCCGCTACGG CGCACTCGGC GTCGTGGCCC CCGACCGCAC ACTCGAGGAA
TTCGTCCACG TCGGCATGAC CGACGCGGAC GTGGAGCGGA TCGGCCACCT GCCCACCGGT
CACGGCCTGC TCGGCATCCT GATCGACGAC CCGCGGCCGC GCCGCGCCGA CGACATCGCC
CATGACCCGG CGTCCCAGGG CTTCCCGGCC GGGCATCCGC CGATGCGGAC CTTCCTCGGC
GTCCCGATCA CTGTGCGGGG CGAGGTGTTC GGCAATCTCT ACCTCACCGA CAAACGCGAC
GGCGTCCCCT TCACCGCGGA GGACGAGGAG CTCGCCCAGG CCCTGGCCGC CAACGCCGGG
GTGGCGATCG CGAACGCGCG GCTCTACCAC GAGGCGCAGC AGCGGCACCT GTGGATGACC
GCCTCGGCGG AGATCAGCCG TCAGGTGATG GTCGGCGCCG ACAACGCGCT CGCCACCCTC
GTGCACCGGG TGCAGGAGGT CGCCGACGCC CCCTTCGTCG CCCTCGCGCT GCACACCACG
AACCAGGGCA CTGCGGACGG AGGCGATCGG AGCAAGGAGG CCGGGTACGC GCGCGTCGCC
GTCGCCGTCA CGGAGCGTCA CGTTACCGGC TCGGCCCACG CCGGTCTGGG CACCGATGCC
AGCCGTGCCG GCCGCCTGAT TCCCCTCGAG CACACCCTGA CCGGCCGGGT GATCGCCGAG
CAGCAGGCTC TTCGCGTCGA CGACTCGGAG CTCGACGCGC TCCCCGACGA GCGCGCGGCA
CGCACCGGGC CGCTCATGGT CGTCCCGCTC GTCGCCGGCG GCGACCAGTG CGGCGGAGCG
CTGCTCATCG GCCGCGACCG CGGCGTCCGC GCCTTCACCG ACGGCGACCT CGACATGGCG
GCAGGCTTCG CCGGCCACGT CGCCGTAGCC CTCGAGCTCG CCCGGGCCCG AGCCGACCAG
GAACACCTGC GGGTACTCGC CGACCGCGGC CGGATCGCCC GTGACCTGCA CGACCACGTC
ATCCAGCGGA TGTTCGCCGT CGCGCTCGGC ATGCAGGATC TCGCCCAGTA CGAGAACCCC
TCCAACGCCG GCCGGCTCAA CGGCTACGTC GAGGACATCG ACGCGACCAT CAAGGACATC
CGCCGTTCCA TCTTCGAGCT GCGCGGACAG AGCCCCACCA AGCGCGGTCG CCTGCGCGCC
GGCCTCAACA AGATCGCGGA CGACGTTCGG CTGGCCCTCG GCTTCGCCCC CGCCATCTCC
CTGACCGGGC CCCTCGACAC CGTCGCGGAC GACCAGCTCA CCGACCATCT GCTCGCCGTC
ACCCGCGAGG CCCTCACGAA CACCGCCCGC CACGCCCACG CGACCAGCGT CGAGGTGCGG
CTGGCCGTGG ACGGGGACAT GGTCACCCTG GACGCCGTCG ACAACGGGGT CGGCATCGGT
GACACCACCC GCCGCAGCGG CCTGGACAAC CTGCGCGCCC GCGCCGAGAG CCTCGGCGGC
ACCTTCACCG CCACGACACC GCCCACCGGC GGCACCCACC TCCGCTGGGC CGCCCCGTTC
TGA
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| Protein sequence | MFPTVARLEL DDLLSQLVDR AQDVLATQGR LRGLLHANRV IATDLRLPVL LRHIVEAATD
LLGARYGALG VVAPDRTLEE FVHVGMTDAD VERIGHLPTG HGLLGILIDD PRPRRADDIA
HDPASQGFPA GHPPMRTFLG VPITVRGEVF GNLYLTDKRD GVPFTAEDEE LAQALAANAG
VAIANARLYH EAQQRHLWMT ASAEISRQVM VGADNALATL VHRVQEVADA PFVALALHTT
NQGTADGGDR SKEAGYARVA VAVTERHVTG SAHAGLGTDA SRAGRLIPLE HTLTGRVIAE
QQALRVDDSE LDALPDERAA RTGPLMVVPL VAGGDQCGGA LLIGRDRGVR AFTDGDLDMA
AGFAGHVAVA LELARARADQ EHLRVLADRG RIARDLHDHV IQRMFAVALG MQDLAQYENP
SNAGRLNGYV EDIDATIKDI RRSIFELRGQ SPTKRGRLRA GLNKIADDVR LALGFAPAIS
LTGPLDTVAD DQLTDHLLAV TREALTNTAR HAHATSVEVR LAVDGDMVTL DAVDNGVGIG
DTTRRSGLDN LRARAESLGG TFTATTPPTG GTHLRWAAPF
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