Gene Franean1_6932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6932 
Symbol 
ID5675245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8444335 
End bp8445906 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content73% 
IMG OID641245781 
Producthypothetical protein 
Protein accessionYP_001511172 
Protein GI158318664 
COG category[S] Function unknown 
COG ID[COG2187] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.381566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTTC AGAAGAATTC GGTGCCGGAC AAAGTGGATC TCGCTTCCGA TTTCTCTGGA 
GAGCTGGAGG CCGGGGCGAC GGAGAAGCAG CCGGCCCCGG AACTCCATCT GGACAACCGG
GAGACCGTGG AGACGCACAC TGCGATCCTT TTCCTGACCG AGGACCGCGT TTACAAGCTG
CGCAAGCCGG TCGACCTCGG CTTCGTGGAT CTCCGCACCC GGCACGCGCG GCTCACGGCC
TGCGAGGACG AGGTGCGTCT CAACCGGCGG CTGGCCCCGG ACGTGTACCT CGGCGTCGCC
GACATCCGGG ACGAAGAGGG TCACCCGCGC GACCACATGG TCGTGATGCG CCGGATGCCC
GCCGACCGCC GGCTGTCGGA GCTGGTGCGC GGCGGCGCCG ACCTGACCGG CGAGCTGCGC
GTGATCGCCC GCACGATGGC GGCGTTCCAC GAGCGGTGCG AGACCTCACC GGAGATCTCC
CGGGCCGGTG GGCTCGCCAA CCTGGAGGCG CTGTGGCTGG AGGCGATGGA CGCCGTCGCG
CCCTTCCGCG GCTCGATCCT GGACGCCGGC ACCGTCGACG AGATCGGCCG GCTGGCCCTG
CGGTACCTGG CCGGCCGGGC GCCCCTGCTG GCGGAGCGGC AGCGCGCCGG GCGGATCCGC
GACGGGCACG GTGACCTGCT CGCCGACGAC ATCTACTGCC TGGACGACGG CCCGCGGGTG
CTGGACTGCA TCAACTTCGA CCGCCGGCTG CGGGTCGGTG ACGTCCTCGC CGACGTCGCG
TTCCTCGCGA TGGACCTGGA GCGGCTCGGC GCCCCGGCGG CGGCCCGGAC GTTCCTCGAC
GCGTACCGGG AGTTCTCCGG CGAGACCCAT CCGGCGTCCC TGGAGCACCT CTACATCGCC
TACCGGGCGT TCGTCCGGGT GCGCATCGCG TGCATCCGCG ACCACCAGGG CGATCCGGAG
GCCGCCGAGG AGGCTCGCCG GCTCGCCGAC ATCGCGCTGG CGCATCTCCG CCGGGGCCGG
GTGCGGCTGG TGCTGGTCGG CGGGCTGCCC GGCACGGGCA AGTCGACGCT GGCGAGCGGC
CTGGCCGACG GGCAGGACGA ATGGGTGCTG CTGCGCTCGG ACGTGGTGCG CAAGGAACTG
GCCGGACTGG CCCCGGACAT CGCGGTCGAC GTCGCCCCCG GTGCGGGGAT CTACGGTGTC
GAGGCGACCG AGCACAGCTA CGCCGAGTTG ATCGCGAGGG CGCGGCAGGC GCTGGAGCGC
GGCCAGAGCG TCGTGCTCGA CGCATCCTGG TCCTCCGGGC TGTTCCGGGA ACTCGCTGCC
GAAACCGCGA AGGCGACCGG CGCCGACCTG GCGCAGGTGC GCTGTGTGGC CCCGGCGCCG
GTCGCCGTCG CCCGCATCGA GTCCCGGCGG TCCATGCGGG CTCGCGGGAC CGGTGCGGAC
GCCTCGGACG CGACGGGCGT GATTCACGCG GCGATGGCCG ATCGCGCCGA CCTCTGGCCG
GCCGCGTTCG AGATCGACAC CACGGGGTCT GTCGAGGAGA CGGTCGCTGC CGCCCGGCGG
GTCGTCGACT GA
 
Protein sequence
MLVQKNSVPD KVDLASDFSG ELEAGATEKQ PAPELHLDNR ETVETHTAIL FLTEDRVYKL 
RKPVDLGFVD LRTRHARLTA CEDEVRLNRR LAPDVYLGVA DIRDEEGHPR DHMVVMRRMP
ADRRLSELVR GGADLTGELR VIARTMAAFH ERCETSPEIS RAGGLANLEA LWLEAMDAVA
PFRGSILDAG TVDEIGRLAL RYLAGRAPLL AERQRAGRIR DGHGDLLADD IYCLDDGPRV
LDCINFDRRL RVGDVLADVA FLAMDLERLG APAAARTFLD AYREFSGETH PASLEHLYIA
YRAFVRVRIA CIRDHQGDPE AAEEARRLAD IALAHLRRGR VRLVLVGGLP GTGKSTLASG
LADGQDEWVL LRSDVVRKEL AGLAPDIAVD VAPGAGIYGV EATEHSYAEL IARARQALER
GQSVVLDASW SSGLFRELAA ETAKATGADL AQVRCVAPAP VAVARIESRR SMRARGTGAD
ASDATGVIHA AMADRADLWP AAFEIDTTGS VEETVAAARR VVD