Gene Franean1_6925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6925 
Symbol 
ID5675238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8435034 
End bp8436314 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content69% 
IMG OID641245774 
ProductHNH endonuclease 
Protein accessionYP_001511165 
Protein GI158318657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.629252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGAA GGCCGACGGC GCACTCGGCC GGCCCAGAAG AAGACGCGGG GGAGACGAGC 
GGCGGCCTCC TTACCCGCGA GGCGCTCGAC ATGAAGGCAG GCGATCTGCT CAGGGAGATC
TCTCGTGTCG TGCGCGTGAT CGCGGCTGGC CACGCGGGTC TGCTGACCCT GCTGGCTCAG
TTCGCAGCCC TCCGGCTCCC GCCGGGCGCC GGGCAGTCGC TGATGTCCGA CGAGTTCGTA
CCAGAAGAGG TAGCCGCCGC GATGGCGGTC TCGCCCCAGT CGGCCACGGC CCAGATGGCG
TTCGCCTGCA CGGTCACCCG GCGTCTCCCG GACGCGGTCG ACGCACTCAG GGTGGGAGTT
CTGGATCTCC AACGGCTGCA CGCACTGGAG AAGGCGGTGC ACCCACTTGA CGATCGCGCC
GCGGGCGAGG TCGAGGCGCG TGTGCTCGCC GGAGGAGCGC GACCGAACCG GCGTGCCTTC
ACCGATGCCT GCCGGCGCGC CGTGGCCAAG GTCGACCCGC AGGGGGCGGC GGATCGGGCG
GAGACCCGGC GCAAGGACCG GCGGGTGTGG GTCTCGCCTG ACGAGGGCGG GACAAGCTCG
CTCGGCGCTG TCCTTCCCGC GGAGGACGCC GAGGCCTGCT ACCGGCGGAT CGATCAGGCT
GCCCGCTCCA TCAGCGAGAA CAGGTCCGCG GGGGATGACC GGACCCGTGA CCAGATTCGT
GCCGACGTGC TGGTCGACCT GCTCACGGGC CGAGGCAGCC ACGCCGCGCC GATGCCGTGC
GAGATTCAGG TCGTCGTACC CGTGACGACC CTGATCGGCC TGTCCGACGA CCCCGGAGAG
ATTCCGGGGT ACGGCCCGAT CCCCGCTCGA ATCGCCAGGG AGATGGCCGA CCGGCCCGGC
TCGACCTGGC GGCGGATTCT GACCGATTCA CAAGGGCATC TGGTCGAGGT CGCCGACCGG
CGTCTCCCTA ACACTGCGCA GGTCCGCCAT GTTCGCGCCC GCAACCGAAC CTGCGTTTTC
ACGGGCTGCA CCCGACCATC ACAGCGCACC GACACCGATC ACACCATACC TTTCTCCGAG
GACGGGCGGA CCCTAACCAG GAACCTCGGC CCGCTGTGCC GCCGACACCA CCGGATGAAA
CATCGCGGCC ACTGGAAAGT TACCCAACCA GAGGAAGGGA CCTTCGTGTG GGTCAGCCCT
CTCGGGCGAA CCAGCATCAC CAACCCCCAC GCATATCTCG AAGTCGATAC GCGCGTAGGA
AGAGAAAATG GGGTGCATTG A
 
Protein sequence
MTGRPTAHSA GPEEDAGETS GGLLTREALD MKAGDLLREI SRVVRVIAAG HAGLLTLLAQ 
FAALRLPPGA GQSLMSDEFV PEEVAAAMAV SPQSATAQMA FACTVTRRLP DAVDALRVGV
LDLQRLHALE KAVHPLDDRA AGEVEARVLA GGARPNRRAF TDACRRAVAK VDPQGAADRA
ETRRKDRRVW VSPDEGGTSS LGAVLPAEDA EACYRRIDQA ARSISENRSA GDDRTRDQIR
ADVLVDLLTG RGSHAAPMPC EIQVVVPVTT LIGLSDDPGE IPGYGPIPAR IAREMADRPG
STWRRILTDS QGHLVEVADR RLPNTAQVRH VRARNRTCVF TGCTRPSQRT DTDHTIPFSE
DGRTLTRNLG PLCRRHHRMK HRGHWKVTQP EEGTFVWVSP LGRTSITNPH AYLEVDTRVG
RENGVH