Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6795 |
Symbol | |
ID | 5675108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8279755 |
End bp | 8282424 |
Gene Length | 2670 bp |
Protein Length | 889 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641245644 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001511035 |
Protein GI | 158318527 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.26152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCCAAG GGAAGCTCAT CGGGCGGGAC GAGGAACGGT CCCGGCTCCT GGCGTTGCTC GGCGACGCGG CCGGGCCGGT CCTGGTGCTC CGGGGGGAGG CCGGCCTCGG CAAGACGGCG TTGCTGGACG AGCTGGCCGC GGCGGCGGCC GGGTTCCGGG TCGTGCGCTG CGCGGGGGCG GAGGCGGAGC GGGACCTGGC GTTCGCCGGG CTGCATCAGC TGGTCTTTCC GTTGCTGCCC GACGCGGCAG GCCTGGATCC CGCGCACCGG GCGGTGATCG ACGCGGCGTT CACCGGTACG GCCGCCGCCG CGCCGCAGGT GATGGCGCTC GGCATCGCCG TGCTGGACCT GCTGACCCTC GTCTCGGCGG CCAGCCCGCT GCTGCTGGTC GTCGACGACG GCCAGTGGCT GGACGTACCC AGCACACAGG TCCTCGCGTT CACCGCGCGG CGCCTCGCGG GTACAGCCGT GCGGGTGGCA GTCGCGGTGC GCCCCGAGGC GTCGTCACCG CTCGACGGGG CTGGGCTGCC GGAGCTGAAC CTGGAGCCGC TGACCGAGCA GGTTTCCACC CGGTTGCTGG ACCTGCAGCA GGCCGGGCTC AGCCCGTACC ACCGGAACAT GATTCTGAAG ACCGCGGCTG GCAACCCGTT GGCGCTGATC GAGCTGCCCC GGGCGGAACT GCTGGACACC GGCACGATCG CGCTGCCGCG GCGGCTGGAG AAGATCTACG GCACGCGGCT GCGCGGCCTG CCGGCGACCG AGCGCGGCGA GCTGCTGCTG GCGGCGCTGG ACGGCACCGG TGCCGGATCG GCGCGCAGGG TCGGCGCGGC CCGGTACCGG ATGCGCGGCG TCGGCCGGGC GGTCGAGGCG GGCCTGCTGG CCCCGGACCC GGCCACCGGG GAGCCGGTGT TCCGGCATCC CCTCGTCCGC TCGGCCGTCG TGCAGGCCGC GACCCCGCAC GAACGCCGGG CCGCCCACGC TGATCTCGCC GAGCTGCACC GCGACAGCCC GGAACGGCGG GCCGTGCACC TGGCCGCCGC CACCGTCGAC CCGGACGACG ACGTCGCCGC GGCCCTCGAA GAGGCGGCCG TCTCGGCTTC GCGGCGCGGC GGTGCGGCGA CCGCGATCAC CTGGCTGACC CGCGCCGCGG AACTCAGCCG CCGACCCGCC GACCGGTCCC GGCGGCTGGC CGACGCCGCG TACGTCGCCG GGCAGGCCGG TCTGCTCGAC ACCGCACAGG GCCTCGCGGA GGACGCCGCG TTGGACGGCC CAGCCGCGGA GATCACCGCA GGGTACGTGG CGCTTTACCG CGAGGGCGAG GTCGTTGCGA ATCACCGGCG GATCACCGCG CTGCTGGAGT CCGGAGTCGC CGACGAACAG CTGACCGAAC GTGCGCTGAG CCTGATGCTG GCGATCAGCC AGTTCGCTGC CGACCCGGTC CGCTGGGAGC GCACCGACGC GCTGTTCGAC CGGTTCGGCG ACCGGATGGG CCCGTCGACG GCGATTGCCC GGGACGCGTG GGGCGACCTG GTGAAGCGCG GTCACGGCAT ACCGGAACGG ATCGCTGACG CCCTCGCCGA TCCCGCCGCT CGCGCGCCGT GGGACGTGAT GCGGCTGACC GTCTCCGCCT ACTATGTGGG CGTTCTCGGC GACCACCGGG AGCTGCTGCT GCGGACGGTC GACCGGGAGA CGGAGGCCGG CGCGGTCACC AGCGTGATGG TGCTGCTCCA GATGGTCATG CTTGACCAGA TCGGCGCCGG CGCGTGGGCG GAGGCTGAGC GCACCGGCCG TCGCGGCCTG GACCTGACCG CCGGGCACGG GTACACGCTG TTCGCTCAGT CGTTCCGGGC GTTCCTCGGC CTGCTGGCCG CCTACCGCGG TGATCTGGCC CGAGCCCGTG ACCTGCAGGC GGCCGTGGAC GCCTGGGGAC GGCCGCGCGG GCTGGGGTTC CTGACCGAGT ACGCGGAGGC GATCGGCGCT GCCGCGGCAC TGAGCGAAGG CGAGTACGAG ACCGCGTACG CCTACGCCGC TGGAATCACC GCCCCGGGCA CGTTCTCCCG CTACTCGCAG CAGGCCACCC GCACGCTGCT CGACCTGGTC GAGGCCGCCG CGCACACCGG CCGGCACGAC GCCGCCCTCG CGCACGCCGA AGCCGCCCGG GATGCGGGCC TGCCGGCGCT GTCGCCGCGT CTGGCGCTGC TCACCGCCGG GGCACTGGCG ATCACCGCGC CGCGGGAGGA GGCCGGTGCG CTGTTCGCCG CCGCGGTCGC GCATCCCGCT GGTCGCGCGT TCCCGTTCGA GCTGGCGCGG ATCCGTCTGG CGTACGGCGC GTGGCTGCGG CGCGCCCGCG AGCTGACTTC GGCGCGCCAG ACGCTGACCG AGGCACTCGG CGCGTTCGAC CTGCTCGGCG CCGCGACCTG GGCCGAACGG GCCCGAGCCG AACTACGCGC CGCCGGCAGG CCGACCCGCG CGGACCGCGC CGCGGTGGCC GCGCTGACCC CGCAGGAACG GCAGATCGCC GAGCTGGCCG CGACCGGGCT GAGCAACCGG GAGATCGGTG CCCGGCTGTT CCTGTCACCG CGCACGGTCG GTGCGCATCT GTACAAGGTC TTCCCGAAGC TCGGCATCAC GTCGCGGGCC TCGCTACGTG ACGCGCTCCA GAGCGGCTGA
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Protein sequence | MGQGKLIGRD EERSRLLALL GDAAGPVLVL RGEAGLGKTA LLDELAAAAA GFRVVRCAGA EAERDLAFAG LHQLVFPLLP DAAGLDPAHR AVIDAAFTGT AAAAPQVMAL GIAVLDLLTL VSAASPLLLV VDDGQWLDVP STQVLAFTAR RLAGTAVRVA VAVRPEASSP LDGAGLPELN LEPLTEQVST RLLDLQQAGL SPYHRNMILK TAAGNPLALI ELPRAELLDT GTIALPRRLE KIYGTRLRGL PATERGELLL AALDGTGAGS ARRVGAARYR MRGVGRAVEA GLLAPDPATG EPVFRHPLVR SAVVQAATPH ERRAAHADLA ELHRDSPERR AVHLAAATVD PDDDVAAALE EAAVSASRRG GAATAITWLT RAAELSRRPA DRSRRLADAA YVAGQAGLLD TAQGLAEDAA LDGPAAEITA GYVALYREGE VVANHRRITA LLESGVADEQ LTERALSLML AISQFAADPV RWERTDALFD RFGDRMGPST AIARDAWGDL VKRGHGIPER IADALADPAA RAPWDVMRLT VSAYYVGVLG DHRELLLRTV DRETEAGAVT SVMVLLQMVM LDQIGAGAWA EAERTGRRGL DLTAGHGYTL FAQSFRAFLG LLAAYRGDLA RARDLQAAVD AWGRPRGLGF LTEYAEAIGA AAALSEGEYE TAYAYAAGIT APGTFSRYSQ QATRTLLDLV EAAAHTGRHD AALAHAEAAR DAGLPALSPR LALLTAGALA ITAPREEAGA LFAAAVAHPA GRAFPFELAR IRLAYGAWLR RARELTSARQ TLTEALGAFD LLGAATWAER ARAELRAAGR PTRADRAAVA ALTPQERQIA ELAATGLSNR EIGARLFLSP RTVGAHLYKV FPKLGITSRA SLRDALQSG
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