Gene Franean1_6674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6674 
Symbol 
ID5674989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8106821 
End bp8108983 
Gene Length2163 bp 
Protein Length720 aa 
Translation table11 
GC content73% 
IMG OID641245525 
Productacyltransferase 3 
Protein accessionYP_001510917 
Protein GI158318409 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.323555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGACGG TTGAGGCCAC CCCGACGATC GGCGACACGT TGACCCTGGT GTCCCCGCCG 
GCCGAGGCCG GCGGGGACAC CAGGGTCAGG AAGTTCCGAC CGGATATCGA GGGGCTGCGC
GCGGTCGCGG TGGTCCTGGT CGTGCTCGGC CACTCCGGGC TCGCCGTCGC CGGCGGGTTC
GTCGGCGTGG ACGTCTTCTT CGTGATCTCG GGCTTCCTCA TCACCAGGCA GCTGCTCACG
GAGCGGGCCG GCCACGGGCG GATCTCGCTG CGGGGCTTCT ACGCCCGACG GGCGCGGCGG
ATCGTCCCGG CGGCGACGGT GGTCATCGTC GCGACGATGG TGGCCGCCTG GCGGTGGGCG
TCACCGCTGC GCCTCCACTC GATCAGCGTG GACGCGGCGT TCTCCGCCGT GTCGGCGATC
AACATCCGGC TCGCCCAGGC CGGGACGGAC TACCTGCGGG CGGACGGGCC GCCGTCGCCG
TTCCAGCATT TCTGGTCCCT CGCCGTCGAG GAGCAGTTCT ACGCCCTGTG GCCGCTGGTG
CTGGTGGCCG TGACCACGGT GATCGCCGGC GGCTGGCGCC GGGGCCGCAC CGGGCCGGTC
CGCACCGGGC GAGTGTTCGC CGTGCTCGTC GCGGTGTTCG GCGGCTCGCT GGCGCTCAGC
GTGCTGCTCA CCCCGCGGTC GGCGCCGTGG GCCTACTTCG GGAGCCACAC CCGGGCGTGG
GAGCTGGCGG CGGGCGCGCT GGTCGCGCTC GGCGCGCCCG CGTTCGCCCG GATGCCCCGC
GCGCTGTCGT CCCAGCTGAG CTGGCTGGGC CTGCTGGGGA TCCTGGTCGC CGCGGCGCGG
TTCGACGAGG GCACGCAGTA CCCCGGGCTG GCGGCGCTGC TGCCGGTCGC GGGCTCGGCG
CTCGTGATCG CAGGCGGGTG CGCCGCGCCG CGCCGGGGCG CCGAGCTGCT GCTGCGCCGG
TGGCCGCTAC AGGTGGCGGG CCGCCTCAGC TACTCGTGGT ACCTGTGGCA CTGGCCGGTG
CTGGTGCTCT GGCCTGAGGC CTCCGGGGCA CCGCTCGGCA CGGGCGGGAA GGTCGCCGCC
GTGCTGGGGT CGCTGGTCCT GGCCGCGCTC ACCTACTACG CGGTCGAGAA CCCGATCCGG
GCCGGGTCGG TGCTGGTCCG TCGGCCGGCG GTCGGCCTTG GCCTCGGTGG TTGCCTGGCC
GGCGCCGCGG TTGCGGTCGC GCTCGGCGTG GGCCAGGTCG CGGCCATCCC CACCACGGGC
GGTGTGGCGC CGATCCCCGG CCCGGCCGAT GCCGCGGCGG GAGCGCCCGG AGCCGGGGGA
ACGGCGGGAA CGGCGGGAAC CGCGGGAACG TCCACCGCTC TGTCCCGGGT GATCGAGCAG
TCGCTGGACC TGCCGGGGCT GCCGGCGGGG CTGCGGCCGT CGCTGGAACA GGTCCCACTC
GACTACAAGG CGAACAGGTG CTACGCGTCG ATCACCGCCA GCACTCCCAC CGACTGCGCC
TACGGGGACC CGAACGGCCG TCGGACGGTC GTCCTGTTCG GCGACTCGCA CGCGAACCAG
TGGTTCAACG CGATGAACAA GGTCAGCCGC GAACGCGGCT GGCGGCTGAT CCCCTACACG
AAGGGCGGCT GCCCGCCGGC CGAATACCCG GACTTCGTGC TGGAGACCCT GAAACGGGTC
TACACCGAGT GCAACACCTG GCGGGCGGAG GCCCTCGCCA GGATCGGCGC GCTCGACCCG
GACCTGGTCG TCGTCGGTTC CGAGGCGCGG ACGGAGGCTA TCCGGGTGGG TGCCGGCGGG
ATGGCGAGCG CCGTGCGCAC GCTGCGCTCG ACCGGGGCCA AGGTCGTGTT CATCTCGGAC
ACGCCCTACC CGGGATTCGA CGTTCCGGAC TGCCTTGCCA GGAATCCGTC GAACATCCGC
CGGTGTGTTG TGCGGGTCTC CGACGCGAAA CTGACCGAAC CGCAGCGGGC CATCGAGAAC
CAGGGTGCCC GCGACGGCGG GGCGATGCTG GTCGATCCCG TGCCGTGGCT GTGCGCGAAG
GAACAGTGCC CGCCAATCAT CGGCGACACG GTCGTCTATT ACGACAAGAG CCACATCACC
GGTACGTACT CCACCACCCT GGCGTCGTAC CTGGGGTCGG AACTGGTCCG GCTGGCCGGA
TGA
 
Protein sequence
MTTVEATPTI GDTLTLVSPP AEAGGDTRVR KFRPDIEGLR AVAVVLVVLG HSGLAVAGGF 
VGVDVFFVIS GFLITRQLLT ERAGHGRISL RGFYARRARR IVPAATVVIV ATMVAAWRWA
SPLRLHSISV DAAFSAVSAI NIRLAQAGTD YLRADGPPSP FQHFWSLAVE EQFYALWPLV
LVAVTTVIAG GWRRGRTGPV RTGRVFAVLV AVFGGSLALS VLLTPRSAPW AYFGSHTRAW
ELAAGALVAL GAPAFARMPR ALSSQLSWLG LLGILVAAAR FDEGTQYPGL AALLPVAGSA
LVIAGGCAAP RRGAELLLRR WPLQVAGRLS YSWYLWHWPV LVLWPEASGA PLGTGGKVAA
VLGSLVLAAL TYYAVENPIR AGSVLVRRPA VGLGLGGCLA GAAVAVALGV GQVAAIPTTG
GVAPIPGPAD AAAGAPGAGG TAGTAGTAGT STALSRVIEQ SLDLPGLPAG LRPSLEQVPL
DYKANRCYAS ITASTPTDCA YGDPNGRRTV VLFGDSHANQ WFNAMNKVSR ERGWRLIPYT
KGGCPPAEYP DFVLETLKRV YTECNTWRAE ALARIGALDP DLVVVGSEAR TEAIRVGAGG
MASAVRTLRS TGAKVVFISD TPYPGFDVPD CLARNPSNIR RCVVRVSDAK LTEPQRAIEN
QGARDGGAML VDPVPWLCAK EQCPPIIGDT VVYYDKSHIT GTYSTTLASY LGSELVRLAG