| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6632 |
|---|
| Symbol | |
|---|
| ID | 5674947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 8064498 |
|---|
| End bp | 8065430 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641245483 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001510875 |
|---|
| Protein GI | 158318367 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.946509 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGCCA TGCAATCGAC GTCCTCGCTG GACCTCAACC TCCTGGTGGC TCTCGACGCC
CTGCTGGAGG AGCGGAGCGT CAACGCCGCC GCGCGGCGGC TGCGGCTGAC CGAGTCCGCG
GTCAGTCGTG CGCTGGGTCG CCTACGCCGG GCGATGGACG ACCCGGTCCT CGTGCGCGCC
GGTCATCGGA TGGTGCCCAC CCCGCGGGCG CTGGCCGTCC AGGCCGAGGT GCATGCCCTG
GTCGAACGGG CCCACGCGGT GTTCACCCCG ATTCGGGAAC CCGACCTGGC CACCCTGGCC
AGGACGTTCA CCATCCTGGC CAGCGACGCG CTGACCACCG CGATCGGCGT TGATCTGCTC
GACCGGTTGA CTCGGGATGC CCCGGGTGTG CGGGTGCGGT TCCTCCCCGA GCCGTCCGCG
ACCGACGACC CCCTCCGCGA CGGAACCGCC GACCTGGAGA TCGGTGACAT CGACTCGACC
TCGCCGGAAA TCCACATCGA GGTCCTGGGT GAGGAGCAGG CCCTTGCCGT CGTCCGCGCC
GGGCATCCAC TGACCCGGGG CCGCCTGACG CCGGAACGCC TCGCCGCCGC CAGGCACGTC
ACGGCGTCCC GCCGGGGGCG GTTCGCCGGC CCGCTGGACG AGGTCCTCGC GGCGCGTGGC
CTGCGCCGGA CGGTGGCGGT CTCGGTTCCG TCCCACTCCG CCGCGCTGCT GCTCGTCGCC
GGCAGCGACC TGGTCGGCCT GGTACCGGCT CGGCTCGGCC GCGGCCTGCT CGACAGCCTC
GGCCTGGTGG CCCTCGACCT CGGACTCGAC CTGCCGACCC TGACGATCGC GCAGGCGTGG
CATCCCCGCT ATGAGGCCGA CGCGCCGCAT CGCTGGCTTC GCGGCCACGT GCGCGACACC
ATCCGGCTCG CGCTCGCGCT CGATCCCCCG TGA
|
|---|
| Protein sequence | MHAMQSTSSL DLNLLVALDA LLEERSVNAA ARRLRLTESA VSRALGRLRR AMDDPVLVRA
GHRMVPTPRA LAVQAEVHAL VERAHAVFTP IREPDLATLA RTFTILASDA LTTAIGVDLL
DRLTRDAPGV RVRFLPEPSA TDDPLRDGTA DLEIGDIDST SPEIHIEVLG EEQALAVVRA
GHPLTRGRLT PERLAAARHV TASRRGRFAG PLDEVLAARG LRRTVAVSVP SHSAALLLVA
GSDLVGLVPA RLGRGLLDSL GLVALDLGLD LPTLTIAQAW HPRYEADAPH RWLRGHVRDT
IRLALALDPP
|
|---|
| |