Gene Franean1_6594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6594 
Symbol 
ID5674909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8024810 
End bp8025199 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content67% 
IMG OID641245445 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001510837 
Protein GI158318329 
COG category 
COG ID 
TIGRFAM ID[TIGR03618] PPOX class probable F420-dependent enzyme 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCA TCTCGCCCAG CCACCGCGAT CTGCTGGCGA AGCCCCACAC GGTCACCTTC 
GCCACGGTCG GTGCCGACGG GCAGCCCCAG GTCACCGCCA TCTGGGCGAT GCTGGACGGC
GACGTCGTAC GCACATCGCT GTCCAGGAGC CGCCAGAAGT ACCGGAACCT GCTGGCGCAT
CCGAAGGTGA CGTTGTTCGT CGTGGATCCG CAGAATCCCT TCCGGACCCT GGAGATCCGC
GCCGCCGCGG AGATCACGGA AGACCCCGGC CTGGAGTTCC TCAGCCGCCT TCTCGGCTTC
TACGGCAGCG ACCTGGAGAC CTTCGAGGGG CCCAGGGAGG ACCGGGTTGT GATCACGCTC
AATCCCACCC GGATCGTCGA GCTCGGGTAG
 
Protein sequence
MLTISPSHRD LLAKPHTVTF ATVGADGQPQ VTAIWAMLDG DVVRTSLSRS RQKYRNLLAH 
PKVTLFVVDP QNPFRTLEIR AAAEITEDPG LEFLSRLLGF YGSDLETFEG PREDRVVITL
NPTRIVELG