| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6589 |
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| Symbol | |
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| ID | 5674904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8018594 |
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| End bp | 8019595 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 641245440 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001510832 |
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| Protein GI | 158318324 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.162386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTAGGG CCGGCGCCGG CCAGGACGCG CGCCCGTCGC GCCCGTTGCA CCCGTCGCGC
CCGTCGCGAC CGGGGCGCAG CCACGCCGAA CCGGTGATGG GCACGGTTGT CAGCATCGAC
GTCCGCTCGC CGCTCGACGC GGTCGGCCTG GACGCGGCGA TCGGTGCCGC GGTCCGTGTG
CTGCATCGGG TCGACGAGGA TTTCAGCACG TTCCGGGCGA CGTCCTGGGT GTCGCGGCTG
CGCCGCGGCG AGATCGAGCT CGGCGACTGT CCGGATCACG TCCGCGAGGT GTACCGGGCG
GCCGCCGAAT GCCGGGAGCA GACCGGGGGA TGGTTCGACC CCGCCTGGCG CGGGGACGGC
ACGCTGGACC CGACCGGGCT GGTCAAGGGC TGGGCGGCCG ACGCCGCGTC GACGGCCCTG
ACCGCCGCGG GTGCCCCGAG CCACTGCGTC AGCGCCGCCG GTGACCTGCG GGTGCGGGGC
ACCTCGGGGT GGGCGCCGGG ACGTCCATGG CGGATCGGGA TCGCCGATCC GTTCGACCGG
GCCAGGCTGG TCGCCGTGGT GGAGGGCACC GAGCTGGCCG TCGCGACCTC GGGGGTCGCC
GAGCGGGGCG CGCACGTCGT CGACCCGCGT ACCGGCGCCC CGGCGACGGG CCTCGCCTCG
GTCACCCTCG TGGGCGCCGA CCTCGTGGGT GCCGACGCCA CGCTCGCGGA CGGGTTCGCC
ACCGCCGCCC TCGCCGCCGG GCCGGAGGCG CCGGCCCTGC TCACCCACCT CGCCCGCCGG
GGATGGGAGT GGCTGACGGT CGACACCACC GGGCGGCTCA CGCACTCCGC CGGCTTCCCG
GGCCAGGCCA CCACGACCGC CGCGGGGCCG GTCGCCGAGA CAGCCCCGCG GCCGGCCGTC
CGAGCGACAG CCCCGCGGCC GGCCGTCCGA GCGACAGCCC CGAGGCCAGC CGTGCGAGCG
ACCGCCCCGA GGCCGGCCGC CGGACGTCCC GACGGGAGAT GA
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| Protein sequence | MSRAGAGQDA RPSRPLHPSR PSRPGRSHAE PVMGTVVSID VRSPLDAVGL DAAIGAAVRV
LHRVDEDFST FRATSWVSRL RRGEIELGDC PDHVREVYRA AAECREQTGG WFDPAWRGDG
TLDPTGLVKG WAADAASTAL TAAGAPSHCV SAAGDLRVRG TSGWAPGRPW RIGIADPFDR
ARLVAVVEGT ELAVATSGVA ERGAHVVDPR TGAPATGLAS VTLVGADLVG ADATLADGFA
TAALAAGPEA PALLTHLARR GWEWLTVDTT GRLTHSAGFP GQATTTAAGP VAETAPRPAV
RATAPRPAVR ATAPRPAVRA TAPRPAAGRP DGR
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