Gene Franean1_6563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6563 
Symbol 
ID5674878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7982833 
End bp7984023 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content66% 
IMG OID641245412 
ProductC-methyltransferase 
Protein accessionYP_001510806 
Protein GI158318298 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCTC CCCGCATCGT CTGCCCTGCC TGTGGCGGGG AAACCATCAT TCCCTTCTAC 
GCCAAGGACC GGGTGCCGTC GCACAGTTGT CTGCTGATGG CGGACGAGGA AGAGGCACGC
GCGTTCCCGA CCGGCAGCCT CCGGATCGCC TTCTGCGAGG GCTGCGGCTT CATCATGAAC
ACCTCCTTCG ATCCGGCCAA GAGCCGATAT TCCGCCCGAT ATGAGGAGAC TCAGGCGTTC
TCGGCTCGCT TCACCGAGTT CGCGCGCGAC CTGGCCAAGC GCTGGGTACA CACGTATGAC
CTGTACGGGA AGGCGATCCT GGAGATCGGT TGCGGCAAGG GTGAGTTCCT CGTCCACATG
CTCGAGGAAG GGGCCGGTTC CGGAATCGGA ATCGACCCGG GCGTCCGTCC CGAGCGGATC
GACACCCCGG TCGCGGATCG GCTGACGTGG ATCAACGACC TTTACTCGGA GCGGTACGCG
CACCTGGCGG CCGACGCGGT GGTGTGCCGC CACACGCTGG AGCACATCGG CCCGGTCGGA
GACTTCATGC GCACCATCCG CGCGGCGATC GGCGATCGGC CGGACATACC GGTCCTGTTC
GAGCTCCCAG ACGTCCTGCG GGTGCTTACG GAGGCGGCGT TCTGGGACGT GTACTACGAG
CACTGCTCCT ACTTCAGCGC AGGCTCCCTG GCGAGGCTGT TCCGGGCCAC CGGATTCGAG
GTGCTTGACG TCCGCCTCGA CTACGACGAC CAGTACCTGC TGATCGAGGC GCGGCCGTCC
AGCGTTCCGG CACCGGGCGA CCCACTGCCG ATCGAGGACG ACATGGCGGA GCTGCACGCA
GGCGTGCGTC ATTTCCAGCG CCACCTCGAC GCCACCCTCC AGGGGTGGAG CGAGCAGGTG
CGGCGGGTGC ATCAGCGCGG GGGGACGACC GCGATCTGGG GCTCCGGGTC GAAAGGTGTG
TCGTTCCTGG CAAGCCTCGG CACCGCCGCC GAACTGGTCC GGTACGCAGT CGACATCAAC
CCGCACAAGC ACGGCATGTT CATGGCCGGT AGCGGCCACC GCATCGTCCC CCCCGAGCGG
CTCCGGCAGG ACACTCCGGA ACTGGTGATC GCAATGAACC CGATCTACTG CGGCGAGATC
GCTGCGGAAC TCGCCCGGCT GGGTGTCGAC ACCGAGCTGA AGGCCGTCTG A
 
Protein sequence
MTAPRIVCPA CGGETIIPFY AKDRVPSHSC LLMADEEEAR AFPTGSLRIA FCEGCGFIMN 
TSFDPAKSRY SARYEETQAF SARFTEFARD LAKRWVHTYD LYGKAILEIG CGKGEFLVHM
LEEGAGSGIG IDPGVRPERI DTPVADRLTW INDLYSERYA HLAADAVVCR HTLEHIGPVG
DFMRTIRAAI GDRPDIPVLF ELPDVLRVLT EAAFWDVYYE HCSYFSAGSL ARLFRATGFE
VLDVRLDYDD QYLLIEARPS SVPAPGDPLP IEDDMAELHA GVRHFQRHLD ATLQGWSEQV
RRVHQRGGTT AIWGSGSKGV SFLASLGTAA ELVRYAVDIN PHKHGMFMAG SGHRIVPPER
LRQDTPELVI AMNPIYCGEI AAELARLGVD TELKAV