Gene Franean1_6562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6562 
Symbol 
ID5674877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7981604 
End bp7982836 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content65% 
IMG OID641245411 
ProductC-methyltransferase 
Protein accessionYP_001510805 
Protein GI158318297 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGACC TGATCGTATG TCGGTCCTGC GGCGCGGCTG AGCTGAAGGA CTTCCTGTCG 
CTGGGAACGA CACCACTCGC CGACGCGCTG GTCCCGGCGG ACGCTCTCGA CCGGCCCGAG
CCACGCTTTC CGCTGGAGGT CGCATTCTGT TCGGCCTGCT CCCTGGTGCA GATCCTCGAG
GAGGTGCCGC CGCAACAGCT CTTCGTCGAC AACTACCTGT ATTTCTCCTC CTTCTCCGAC
CATCTGCTTC AGCACGCCCG GGAGCATGCG CTCAACCTGA TCGAGAGTCG TGGGCTCGGT
CCGGACAGCC TGGTGGTCGA GCTTGCCAGC AACGACGGTT ACCTGCTCCG TAACTTCGTC
GAGCGCGGGA TACCGGTACT CGGCGTCGAT CCGGCGCCAG ACCAGGCAGC GGTCGCCGAA
CGCATCGGAG TCCCGACCCT GCCAGAGTTC TTCGGCACCC GACTCGCCCG GCGCATCCTC
GATGAGCACG GTCCCGCCGA CGTGGTCATC GCGAACAATG TCATGGCCCA TGTACCAGCC
CTGAACGACT TCGTCGCGGG GATGCGGATG CTGGTGGCCG AAGGCGGGCT GATCACGGTG
GAGAACCCCT ACGTGCGGGA TCTCGTCGAG CAGCGCCAGT TCGACACCAT CTATCACGAG
CATTTCTGCT ACTACTCGTG TACGGCCGTG GACAACCTGG TCCGTCGGCA CGGCCTCTTC
CTCAACGACG TGGAGTACTT CCCGAACCTG CACGGCGGCA CCCTGCGTTG GCACCTCGAA
CCGCGCGAGG AGGTCCGCGA CACGGTGCGG CGCTCCCTCG CCGAGGAGGC CAGCAGGGGC
ATGACGTCCT TCGATTACTA CGCCGACTTC GGCGTGGCGG TCGAGCAGAT CAGGACCGAG
CTGCGGTCGC TGCTGACCTC ACTGCGCGCG GAGGGTGGCC GTATCGCTGC CTACGGCGCG
GCTGCCAAGG GCGCCACCCT GATCAACTAT GTCGGCATCG GCACAGACCT GGTCGATTTC
GTCGTCGACC GGAACGTGCA CAAACACGGA CGTCACATGC CTGGCACCCA TCTACCGATC
AGGCCCACCG ACGTGCTCCT GACCGAACAG CCGGACTACG TCCTGCTGCT GGCCTGGAAT
TTCGCCGAAG AGATCATGCA GCAACAGGCG GAGTACATCC GGCGTGGCGG CCGGTTCATC
ATTCCCGTCC CCAGACCGGA GGTCGTCCCA TGA
 
Protein sequence
MRDLIVCRSC GAAELKDFLS LGTTPLADAL VPADALDRPE PRFPLEVAFC SACSLVQILE 
EVPPQQLFVD NYLYFSSFSD HLLQHAREHA LNLIESRGLG PDSLVVELAS NDGYLLRNFV
ERGIPVLGVD PAPDQAAVAE RIGVPTLPEF FGTRLARRIL DEHGPADVVI ANNVMAHVPA
LNDFVAGMRM LVAEGGLITV ENPYVRDLVE QRQFDTIYHE HFCYYSCTAV DNLVRRHGLF
LNDVEYFPNL HGGTLRWHLE PREEVRDTVR RSLAEEASRG MTSFDYYADF GVAVEQIRTE
LRSLLTSLRA EGGRIAAYGA AAKGATLINY VGIGTDLVDF VVDRNVHKHG RHMPGTHLPI
RPTDVLLTEQ PDYVLLLAWN FAEEIMQQQA EYIRRGGRFI IPVPRPEVVP