| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6427 |
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| Symbol | |
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| ID | 5674742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7808199 |
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| End bp | 7808915 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641245275 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001510670 |
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| Protein GI | 158318162 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.140089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.356444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCCG CCGGGCCCGC GCTGCGGGTG CTGCTCGTCG ACGACCAGCA GCTCGTCCGC
GCGGGCATCG CGCTCGTCCT GAGCGGGGAG CCGGGTATCG AGATCGTCGC CGAGCGCTCG
GACGGCGACG AGGTCGTCGC GGCGGTGCGC GCGGTCCGCC CGGACGTCAT CCTGCTCGAC
ATCCGCATGG CCCGGATGGA CGGGGTGGAC GCCCTGCGCG CCCTGGCCCG GCTGGGGGAG
CACCCGCCGG CCCTGGTGCT CACCACGTTC AGCGACGACG ACGTCGTCTG GGGCGCCATG
GCAGCCGGGG CGGCGGGCTT CATCCTCAAG GACCGGCCGG CCGAGGACAT CGTGCGCGCG
ATCAGGCTGG TCGCCGAGGG AGGCTCGTGG ATCGACCCGT CGGCGAGCGG ACGTCTGCTC
GGCGCGCTGC GCACCGGGGC CGTGGCCGAT CTCGCGGTCC GGCGCCGGTT CGAGCGCCTC
TCCGAGCGGG AGCTGCAGGT GCTGCGGGCG ATGGCGCGCG GGGCCAGTAA CCGGGAGATA
GCGATCGAGC TGCGGGTCAG CGAACGGACG GTCAAGGCGC ACGTCGGCAG CATCTTCGGC
AAGCTCGAGG TGCGGGACCG GGCCGGGGCG ATCGTGTTGG CGCACGATGT GGGGCTACGA
GCGCCGGGCT CGGGCGGATC CGGCCCCGCG GGGGGTGTGC GAAACCTGAG CAGATGA
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| Protein sequence | MSAAGPALRV LLVDDQQLVR AGIALVLSGE PGIEIVAERS DGDEVVAAVR AVRPDVILLD
IRMARMDGVD ALRALARLGE HPPALVLTTF SDDDVVWGAM AAGAAGFILK DRPAEDIVRA
IRLVAEGGSW IDPSASGRLL GALRTGAVAD LAVRRRFERL SERELQVLRA MARGASNREI
AIELRVSERT VKAHVGSIFG KLEVRDRAGA IVLAHDVGLR APGSGGSGPA GGVRNLSR
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