| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6399 |
|---|
| Symbol | |
|---|
| ID | 5674715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7767055 |
|---|
| End bp | 7768737 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641245248 |
|---|
| Product | stress protein |
|---|
| Protein accession | YP_001510643 |
|---|
| Protein GI | 158318135 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.266447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.175346 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCTG TACCCACCCT GCCGAAGGGC GCCAACACCG TCATACCGAC GGAGGTCGTC
ACAGCCGTCG TCAGCTCGGC TTCGGGCGAG CCGGTGGATG TCTGCGCCGT GCTGGTGACG
AGCGCCGGCC AGGTCCGGTC GGACGCCGAC ATCGTGTTCT ACAACCAGCC CCGGCACAGC
TCCGGCGCGG TCAGCCTCGT CTCCTCCGGT GCCGGCGCCA CGCTGACCGT CGCCCTGCCG
GACGTCGAGC CCGACATCGT CACCGTGGTG GTCGCGGGAT CGGTCGACGA CGGGACCTTC
GCCCAGGTCG ACGGCCTGCG GTTGCGCATC GACGGCGTCG CGGGCCGGCC GCTCGTCGAG
TTCGCGTCGG CGACGTCCGA CCCGGTGACG ACGATGGTCT TCGGCGAGAT CTACCGTCGG
GGAGGCGGGT GGAAGTTCCG CGCCGTCGGC CAGGGCTGGG CCAGCGGCCT CGCCGGCCTG
GCCCGCAGCT TCGGGATCGC CGTCGAGGAG CCGGACGAGG CCGCCGGGAA CGGCGAGACC
ACCGGGATCG CGGCCTCGCC ACCCGCATCG CCGCCGCCGG CCGCACCGGT CCGACCGCCC
GCACCGGGCC GGCCGGCCGA GCCGGCGCGC CGGGCCGACT GGTACCCCGA CCCTGCGGCG
CCCGGCCTGC TGCGGTGGTG GGACGGCACG ACCTGGGCGT CCCGCACCAG GCAGCCCTTC
GTCGAGTCGG AGGCGACCTG CGGCAGGTGC GGCGCGGCGA AGCGGCGGCG CCTGTTCTCC
GCCCCGGTGC CCTGCGTGGC ATGCGAGGAC GAGATCCGCC GGGTCCTGGC CGACTGGCGG
CGGCGGCTCG TCGAGGCGGT GGACGCCGGT CCCGGCGCGC CCGGGCTGGA CGCGCTGTGG
GCCGAGCTGC GCTTCCAGCT GGTGCCGGAG GCCGCCGGCC AGCAGGTGTT CCGGTCGGTC
GCCCTCGCCT ACCTCCAGCG GATCGTCACC TTCGCGTTCG GTGACGAGCT CATCGAGGAG
CACGAGTACC AGCTCTTCGA GGACGAGGCC CGCCGCCTGG GCGTCGCGGA CCCGGCCGTC
GAGGAGATGC GCCGCAGGCT CCGCCGGGGA CTCGACCTCT CCCGCATCCG CAACGGCGAC
CTGCCGCGGG AGACGTCCTC GACGCTGCAC CTCGATCTCG ACGAGATCGT GCACCTGGAC
ACCGACGTGG TGCAGGTCCG CCAGCTCGCG AGCGGTCCCC GGCACACGCC CGGACGTCTG
GTCGTCAGCA ACCGCAAGCT GCGGTTCCTC GCCCAGAACG GTGGCGGGAC GGAGACCGCC
TGGTCGAAGA TCGTGGCCGT CGCGGCGGGC TACGGCACCA TCGACGTCTC GGCGACGACG
AGCCGTGGCG GTGGCACCTA CCAGGTCGGG GACCCCGAGT ACGTGGCGGC GGTCCTCGCC
GGCACGCTGC GGATCGCCCG CCGGCTGGTG ATCGCGCCCG GCGCCCGGGA CAGCCGTGCC
ATCTCCCAGG CGGTGAAGGC CGAGGTCTGG CAGCGTGACG GCGGCGCGTG CGTGCAGTGC
CAGGCCACCG AGTACCTGGA GTTCGACCAC GTCATCCCGC ACAGCCGCGG CGGGGCCAGC
AGCGTGAACA ACCTCCAGCT GCTCTGCCGC CGCTGCAACC TGGAGAAGGG CGCCCGGATC
TGA
|
|---|
| Protein sequence | MVAVPTLPKG ANTVIPTEVV TAVVSSASGE PVDVCAVLVT SAGQVRSDAD IVFYNQPRHS
SGAVSLVSSG AGATLTVALP DVEPDIVTVV VAGSVDDGTF AQVDGLRLRI DGVAGRPLVE
FASATSDPVT TMVFGEIYRR GGGWKFRAVG QGWASGLAGL ARSFGIAVEE PDEAAGNGET
TGIAASPPAS PPPAAPVRPP APGRPAEPAR RADWYPDPAA PGLLRWWDGT TWASRTRQPF
VESEATCGRC GAAKRRRLFS APVPCVACED EIRRVLADWR RRLVEAVDAG PGAPGLDALW
AELRFQLVPE AAGQQVFRSV ALAYLQRIVT FAFGDELIEE HEYQLFEDEA RRLGVADPAV
EEMRRRLRRG LDLSRIRNGD LPRETSSTLH LDLDEIVHLD TDVVQVRQLA SGPRHTPGRL
VVSNRKLRFL AQNGGGTETA WSKIVAVAAG YGTIDVSATT SRGGGTYQVG DPEYVAAVLA
GTLRIARRLV IAPGARDSRA ISQAVKAEVW QRDGGACVQC QATEYLEFDH VIPHSRGGAS
SVNNLQLLCR RCNLEKGARI
|
|---|
| |