Gene Franean1_6362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6362 
Symbol 
ID5674678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7723359 
End bp7724609 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content77% 
IMG OID641245211 
Producthypothetical protein 
Protein accessionYP_001510606 
Protein GI158318098 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTCG ACCCGACGGT CGTGCCCACA CCGGAACACT GTGTGACGGC GCTGCTGGAC 
GCGTACGTGG TGGGTGAGTG CACGGCCGCC GCGGCGGGCG CCATCGAGAC CCACCTCGGC
CGGTGCGTGA GCTGTTCCGT CGACGCGGCA CAGCTCGCCC TCACCGTCCC GCCGCCGGCC
TGGTCCGTCG CCGGGCCCCC TGACGCGCCA GCCGCCGACG TCGACATGGA CCTCACACCC
GGCCGACCCG GGTCGCTCGA CGCCGTCCTC GCCGCGGCGC TCGCCGCCCG GCCCGCCGCG
CCCGGCACGG TCGTCGCGGG CCTGACAGCA GCGGCACAGG CTGGCCCCGC CCGGCCGCGC
GGACCGCGGA CCCCGACCCA CGGGAGCCGG GCTGCCGCGC TCGACAGGCT GCTGGCCGAG
CTCGCCCCGG CGCACTGGGG GCGCCCGGCC GCGGCCGGCT GGTCGGTGCG TGAGCTCGTG
CTGCACCTGT ACGCCGTCGA CGGCCTGTTG CTGGCCGCCC TCGATGGCGC CGGCAGCGAC
GCCGGCACCG GCAGCGACGC GCCCGGCGAC CTGGGACGGC CGGACGAGGA TCCGGTGTCG
CGCACCGAGG CCGTCCTGGC GGCCACCCGG GAGTGGTCGG TCGAGCAGGT TCGGCTGCGC
TGGTTCGAAC GCGCGGGGTT GGTGTGCGCG GCCGTGGCCG ACGCGACCCG GGCCTCGGGG
CCGTCAGCTG TGACGGCGGG CGGCTGGACG ACCACCCCGG CGGACCACCT GACCGCCCGG
GCGTTCGAGA CGTGGATCCA CACCCGGGAC ATCGCTGCGG CCGCGGGTCT GGCCGTACCG
GATCCGGGCG GGGACGAACT GCACACCATG GCTGATCTCG CGCTGCGCCT GCTGGCCGAC
CCGTGGACGG CGGCCGTGGA GACGGCCGGG CCGGCCGCGC TCACCGTGAC GTTGACCGGG
CCGGGCGGCG GTACCTGGTC GCTGGACCCC TCCGGTGTGC ACGAGCGGGA GAACGGCGCC
GGCCTGGTGG AACCTGGCCC CGCCGCGGAT CTGGCGCGCA CGACCGGCCC GGCGTCGGGC
CCGCTGACCG CGGGTGCCGT GACCGCGGGC GCTGTGACCG CGGGGATCGT TCCGTTCTGT
CTGCTGGCCG GCGATCGCGT GACGGTGGAC GCGGTGGCCA CGAGGATGGA GGGCGACGAG
CAGCTCGCCG TCGAGCTCCT CACTCTCGCT CCCAGCCTGG CCGGCCCCTG A
 
Protein sequence
MTVDPTVVPT PEHCVTALLD AYVVGECTAA AAGAIETHLG RCVSCSVDAA QLALTVPPPA 
WSVAGPPDAP AADVDMDLTP GRPGSLDAVL AAALAARPAA PGTVVAGLTA AAQAGPARPR
GPRTPTHGSR AAALDRLLAE LAPAHWGRPA AAGWSVRELV LHLYAVDGLL LAALDGAGSD
AGTGSDAPGD LGRPDEDPVS RTEAVLAATR EWSVEQVRLR WFERAGLVCA AVADATRASG
PSAVTAGGWT TTPADHLTAR AFETWIHTRD IAAAAGLAVP DPGGDELHTM ADLALRLLAD
PWTAAVETAG PAALTVTLTG PGGGTWSLDP SGVHERENGA GLVEPGPAAD LARTTGPASG
PLTAGAVTAG AVTAGIVPFC LLAGDRVTVD AVATRMEGDE QLAVELLTLA PSLAGP