| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6331 |
|---|
| Symbol | |
|---|
| ID | 5674650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7690396 |
|---|
| End bp | 7691514 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641245184 |
|---|
| Product | 2-alkenal reductase |
|---|
| Protein accession | YP_001510579 |
|---|
| Protein GI | 158318071 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATGG GTCATCTCTC AAGGAGCAGG AGATTGCGGC GGTGGCTCGC CCTGCCGGAG
ACTCCCAGAC CGTCGATCCG GCACAGGTCG GAGTTTTCGG CCTGGATCGT GGCCGCTGGC
CTGGCGGCTG GCGTCCTGTT CGGGACGGCG GCGTGCGGTA CCGCGACCGA CGACGCATCC
ATGTCCCGGG CCGAGACCAC GAACTCGCAG CCCGCCGGAC TCCCCGCCGT GGTACGCGAC
GCCGAGTCGT CCGTGGTCAC GATCTTCGTC GGAAACGGGC TGGGCAGTGG CGTCGTCTAC
CGAGCCGACG GCGTCATCGT CACCAACGAG CATGTCGTAC GGTCCGCGGC CGACCGCAGG
GTCGAGGTGG CCTTCGCCGA CGGCCGCCGA GCCCCGGGCC GAGTGCAGGC CGCCGACCGG
ATCAGCGACA TCGCGGTCGT CAAGGTCGAT CGGAGCGGCC TGCCCACCCT GACGTTCCGT
AGCGAGCTTC CCCAGGTGGG CGAGCTGGCC GTGGCGATCG GTAGCCCGCT TGGGTTCGAG
AACAGCGCCA CCGCCGGCAT CGTCTCCGGG CTGAATCGCA CCCTGCCGGC ATCCGGCCAG
CCCGGCCGCC TAGGCCAGCC GCTGGTCGAC CTGATCCAGA CCGACGCGGC GATCTCCCCC
GGCAACTCCG GTGGGGCGCT CCTGGACGGG CAGGGCCGCG TCCTGGGCAT CAACGAGGCC
TACGTGCCCC CGTCGGAGGG GGCTGTCTCC CTGGGCTTCG CGATCCCGTC AGCCACCGTT
GTCGACGCTG CCGATCAACT GCTGCGCACT GGCGAGGTGC AGCACGCCTT CCTCGGCGTC
CAGGTCACCA GCCTCACGCC CGAAGTCGCC CGGCAGCTCG ACATCCAGGT CGACAGCGGC
GTCCTGGTGC TCTTTGTCGC CGACCAAGGT CCGGCCGACC GTGCCGGTGT CCGGCTCGGC
GATGTGATCC GCACCTTCAA CGGCGAGCCG GTGAGATCCC CCACCGACTT CCTGGCCCAA
CTCCGCAGTG TCGACCCCGG CCGGCAGGTG ACGCTCGGTA TCCGCCGCAA CGGCGACGAC
CTCGAGGTGA AGGCCACCGT CGCAGACCGG CCCGCCTGA
|
|---|
| Protein sequence | MDMGHLSRSR RLRRWLALPE TPRPSIRHRS EFSAWIVAAG LAAGVLFGTA ACGTATDDAS
MSRAETTNSQ PAGLPAVVRD AESSVVTIFV GNGLGSGVVY RADGVIVTNE HVVRSAADRR
VEVAFADGRR APGRVQAADR ISDIAVVKVD RSGLPTLTFR SELPQVGELA VAIGSPLGFE
NSATAGIVSG LNRTLPASGQ PGRLGQPLVD LIQTDAAISP GNSGGALLDG QGRVLGINEA
YVPPSEGAVS LGFAIPSATV VDAADQLLRT GEVQHAFLGV QVTSLTPEVA RQLDIQVDSG
VLVLFVADQG PADRAGVRLG DVIRTFNGEP VRSPTDFLAQ LRSVDPGRQV TLGIRRNGDD
LEVKATVADR PA
|
|---|
| |