| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6282 |
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| Symbol | |
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| ID | 5674601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7629914 |
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| End bp | 7631014 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641245134 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001510530 |
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| Protein GI | 158318022 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2856] Predicted Zn peptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCGG CAATGCATGA CGGCCAGTCG GCGTACGCGG GCGAGCGCAT CCGAGCGGCT
CGTACGCTGC TCGGCCTCTC ACAGGGCGAT CTAGCCGAAG CCTCCGGGGT CGGCCAGACA
ATGATCTCGA AGATCGAGAG TGGGGCGAAG TATCCATCGG ACGATCTTCT CGACACAATC
GCCGCGGTCA CGGGCACGCC GCGCTCGTTC TTTGATGTTG TGCCCCTGGA TATCCCGCCG
ATGACGCTGC GCTTCCGGAA GTCCTCTCAG GCGAAGCGGG GCGATACCAA GAGGGTTGAT
CAACTGCTCG CGGAGGCTTA CCGCATCGTC TGGACCTTGG TGAAGCAGCA CGACCGCTAC
CTCGCCCCGA CGATCCCCCT CGCGACCGGA GAAGAACTGT CCGGGGAGGA CATCGAGGAG
CTGGCCGCGC GTACCCGGGA GGCGCTCGGC CTCGACCTGC ACAGCCCCGT CAGGCACGTC
ACTCGCATCT GCGAGCGAGG CGGAATCCTC GTCGCCCCGA TCAGCCTGCC CGGCGACGGC
GACGAGTCGG AGACCGTTGG CCATTTCGGG GCGTCCTGCT GGCCTGGCCC GCCTGAGCCG
GCGCTCATCG GCTTCTTCCC CGACGGCCCC GGTGATCGGC AACGGTTCAC CCTGGCCCAC
GAACTAGGAC ACTTGGTCCT CCACACCCGC CGCCACTACA TCCCCGACCC GGAAGGGGAA
GCGAACCGCT TCGCGGGCGC CTTCCTAGTC CCCGCCGAAC CCCTGCGGGA AGCGATGGCT
GACCAGGACT TCACCTTGCG GGACTTCGCG GGCCTCAAAG CGCGCTGGGG CGTCTCCATC
CAGGCGCTGA TCATGCGAGG AAGTCATCTC GGGCTCATCG ACGCCCGACG CAAGGAGTCG
CTGTTCAAGC AGATCTCGGC GCGAGGGTGG AGGAAGCAGG AGCCGGTCCA GGTCCACCAC
GAGGAGCCGG CCCTGTTCTG GAAGCTCATG GCCACGGAGT TCGGCACCAG CAGGTCGGTC
TACAACACGG CCGGCGATCG GCTCGGCCTT CACTCCTTCC TCCTAGGCCA GCTCGCTCCC
CGCGCCACCC CGCGGAAGTA G
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| Protein sequence | MLAAMHDGQS AYAGERIRAA RTLLGLSQGD LAEASGVGQT MISKIESGAK YPSDDLLDTI
AAVTGTPRSF FDVVPLDIPP MTLRFRKSSQ AKRGDTKRVD QLLAEAYRIV WTLVKQHDRY
LAPTIPLATG EELSGEDIEE LAARTREALG LDLHSPVRHV TRICERGGIL VAPISLPGDG
DESETVGHFG ASCWPGPPEP ALIGFFPDGP GDRQRFTLAH ELGHLVLHTR RHYIPDPEGE
ANRFAGAFLV PAEPLREAMA DQDFTLRDFA GLKARWGVSI QALIMRGSHL GLIDARRKES
LFKQISARGW RKQEPVQVHH EEPALFWKLM ATEFGTSRSV YNTAGDRLGL HSFLLGQLAP
RATPRK
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