Gene Franean1_6159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6159 
Symbol 
ID5674480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7492759 
End bp7493712 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content71% 
IMG OID641245011 
Productaldo/keto reductase 
Protein accessionYP_001510409 
Protein GI158317901 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.145044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.449147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTATC GCCCCCTGGG ATCTTCGGGC CTGATGGTCT CCGTCGTCGG GCTGGGATGC 
AACAACTTCG GGTCCAGAGT CGACCTGACC GGTACGCGTG CCGTCGTCGA GGCCGCCCTC
GACTCCGGGA TCAACTTCTT CGACACCGCC GACACCTACG GGAACAAGGG CGGCTCGGAG
ACCCTGCTGG GGCACGTGCT CCGGGGCCGG CGCGACGACG TCGTCCTCGC CACCAAGGTC
GGCAACGACA TGGGCGGCAT GTACGGCCAG GACTTCAACG CGCGCGCCTC CCGCCGCTAC
ATCCGCAAGG CGGTCGAGGG GTCGCTGAGC CGGCTGCAGA CCGACTACCT CGACCTTTAC
CAGCTCCACA ACCTGGACGC CTTCACCCCC GTCGAGGAGA CGCTGGAGGC GCTCGGCGAG
CTCGTCCAGG AGGGCAAGGT CCGCTACGTC GGCTCGTGCA ACCTGGACGC CTGGCAGGTG
TCCGACGCCG AGTGGACGGC ACGGGCGTCC GGCACCACCC GGTTCATCTC TGCCCAGAAC
CACTACAACC TGCTCGTCCG GGACGTCGAG GCCGAGCTGG TGCCGGCCGC CCTCAAGTAC
GGGATCGGGG TCATCCCCTA CTTCCCGCTG GAGAACGGCA TCCTGAGCGG CAAGTACCTG
CGCGACGAGG CGCCGCCGGC CGGCACCCGG ATGGCGGGCC GCCAGGACGA GCTCACCGAC
GACCTGTTCG ACCGGGTGGA GACCCTGGAG ACCTTCGCCA GGGAGCGGGA CCGCTCGCTG
CTGGACGTGG CGATCGGCGG CCTCGCCGCC CAGCCCGCGG TCGCCTCCGT GATCGCCGGT
GCGACGAGCG CGGCGCAGGT CCGGGCGAAC GCCGCGGCCG GCCAGTGGCA GCCCCGAGCG
GACGACCTCG CCGTCCTCGA CAAGATCGCT CCCACCCGCC GCCCGGGGGC CTGA
 
Protein sequence
MRYRPLGSSG LMVSVVGLGC NNFGSRVDLT GTRAVVEAAL DSGINFFDTA DTYGNKGGSE 
TLLGHVLRGR RDDVVLATKV GNDMGGMYGQ DFNARASRRY IRKAVEGSLS RLQTDYLDLY
QLHNLDAFTP VEETLEALGE LVQEGKVRYV GSCNLDAWQV SDAEWTARAS GTTRFISAQN
HYNLLVRDVE AELVPAALKY GIGVIPYFPL ENGILSGKYL RDEAPPAGTR MAGRQDELTD
DLFDRVETLE TFARERDRSL LDVAIGGLAA QPAVASVIAG ATSAAQVRAN AAAGQWQPRA
DDLAVLDKIA PTRRPGA