| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6150 |
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| Symbol | |
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| ID | 5674471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 7481924 |
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| End bp | 7483153 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641245002 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_001510400 |
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| Protein GI | 158317892 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.274671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.61333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG ACACGCAGGC CCTCCGACCG GCACCGGCCC CGTCTCCGCT GCTCGCGCGG
CCCGGAGCGG TCGCGGCCCC CGAGCCGGAC GCGACGGTCG CGGCCCACTA CGGCGATCCG
CTGCGCGAGC AGCGCCGGGC AGTCACCACC GCGGTGCTGG TCGACCGCTC CAACCGCGGC
GTGCTGCGCG TCACCGGTCC GGAGCGGCTC ACCTGGCTGC ACAGTCTGAC CTCGCAGCAC
CTGTCGCAGC TGGCCCCGGG GCGAGGCACC GAGGCACTGG TGCTCTCCCC GCACGGCCAC
ATCGAGCACC ACCTGGTGCT CGCCGACGAC GGCACCGCCA CCTGGATCGA CGTCGAGCCC
GGGAGCGCGC CGCGGCTGCT GTCCTTCCTG GAGTCGATGC GGTTCATGCT CCGGGTCGAG
CCGGGTGACG CCACGGCCGA GACGGCCGTC CTGTCGCTGC TCGGCCCGGG CGCGGCCGAC
GTCGCCCGGG CCGTGTTCGG GCCGTCCGCC GTCCCCGGCG AGGCAGGCGG CGGTCCTGCC
GCGGGCACTG CCGCCGCGGG CTCCCCCACC GCGGCCGGTG CCGTGACCAC CGGCCCGTAC
CCGGTCACCC GCGCGGCGGC CACGACCGAC CCGACCGCCA CCGGCGCGGC CGTGGGCGGC
CCGGCCCCCC TGATCCGCCG GATGCCCTAC GGGCTGGACC TGCTGGTCGC ACGCGCGGAT
CTCGCCACGA TCGCCGACCA GCTGGTGGGC GCCGGAGCCA CCCCGGCCGG CCTGAGCGCG
TTCGAGGCGC TGCGGATCGC CGCGCGCCGG CCGCGCCTGG GCCGGGAGAC CGACCACCGC
ACCATCCCGC ACGAGGTGGG GTGGCTGCCG GCTGCCGTGC ACCTGGACAA GGGGTGCTAC
CGCGGCCAGG AGACCGTCGC CCGGGTGCAC AACCTGGGTC GCCCGCCTCG GCGCATGGTG
CTGCTGCACC TGGACGGCGC CGTCGCGGCT CCGGGTACCC CGGTCACCTC GGGCGGTCGC
GCGGTCGGCT TCGTCGGGGC GTCCGAGATG CATCACGAGC TTGGCCCGAT CGCGCTGGCC
GTGGTGAAGC GCTCGCTTCC GGCGGACGCA GTGCTCGTCG TCACCGACCC CGACGGCGCC
CAGGTGGCGG CGACGATCGA CCCCGAGGCC GGCCCGGAGC AGCCGACCCG TCCCGCGGGG
CGCCTGCTGC ACCCGCACAC CGGAGGCTGA
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| Protein sequence | MSTDTQALRP APAPSPLLAR PGAVAAPEPD ATVAAHYGDP LREQRRAVTT AVLVDRSNRG
VLRVTGPERL TWLHSLTSQH LSQLAPGRGT EALVLSPHGH IEHHLVLADD GTATWIDVEP
GSAPRLLSFL ESMRFMLRVE PGDATAETAV LSLLGPGAAD VARAVFGPSA VPGEAGGGPA
AGTAAAGSPT AAGAVTTGPY PVTRAAATTD PTATGAAVGG PAPLIRRMPY GLDLLVARAD
LATIADQLVG AGATPAGLSA FEALRIAARR PRLGRETDHR TIPHEVGWLP AAVHLDKGCY
RGQETVARVH NLGRPPRRMV LLHLDGAVAA PGTPVTSGGR AVGFVGASEM HHELGPIALA
VVKRSLPADA VLVVTDPDGA QVAATIDPEA GPEQPTRPAG RLLHPHTGG
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