Gene Franean1_6132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6132 
Symbol 
ID5674453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7461455 
End bp7462387 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content71% 
IMG OID641244984 
Productredox-sensing transcriptional repressor Rex 
Protein accessionYP_001510382 
Protein GI158317874 
COG category[R] General function prediction only 
COG ID[COG2344] AT-rich DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.249873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCAAC CTCGGCGGGG TGCCGGGCGG GTACCGGGGC GGTCGCCGGT GCCCGAGGCG 
ACGGTGGCCA GGTTGCCCCT CTACCTCCGT GTGCTGACGG CGCTCGGCGA GCGCGGCGTG
CACACGGTGT CCTCGGACAC GCTCGCCGCG GCCGCCGGCG TGACGTCGGC GAAGGTACGC
AAGGACCTCT CCCAGCTCGG CTCGTACGGC ACGCGCGGAG TCGGGTACGA CGTGGGCGTG
CTCCTTGAGT GCATATCGGC CGAGCTCGGC CTGACCGAAG ACCGCTCGGT CGTCCTCGTT
GGCGTGGGTA ACCTCGGGCA TGCACTTGCC GGATACGGCG GCTTCCATGC CCGAGGGTTC
CGCATCGCGG CATTGGTGGA CGCCGATCCG TCCAGGGTGG GTGAGCGGGT CGGTGAGGTC
GTCGTTCGCC CGGTCGACGA GCTGGAGGCG GTCATCGAGG ACTGCCAGGT GACCATCGGC
GTGATCTCCA CGCCGGCGGC CGCGGCGCAG AGCGTCTGCG ACCGCCTCGT GGCAGCGGGC
GTGACCAGCA TCCTGAACTT CGCCCCCACG GTGCTTTCGG TGCCCGAGGG AGTGGATGTG
CGTAAGGTCG ACCTTGCCCT GGAACTGCAG ATTCTCTCCT TTCACGAAGC GCGTAAACGT
CCGTCGCCAG GCCGGGCCCC CGGCGCGGGG GACGTGGTGG TCGGCGATCA GCCGGGGTCG
GGCGGATTCG TGGATGACGA GGCTGGTGAG GTCGTGCGGA TGACCCGTCG GATGGTGCCA
CCGTCACCCT TGGCGCAGCC TTCACCGCTG GCGCAGCCGG TGGCGCGGCA GTCGCGGGCG
GCACAGGCGG CGCAGGCACC GGAGGCGGCA CGGATGGCGC AGGCGCCGGA GGTGCCGATG
CCGGCCGCCA CTCACGGGGG TGAGGCGGAG TGA
 
Protein sequence
MGQPRRGAGR VPGRSPVPEA TVARLPLYLR VLTALGERGV HTVSSDTLAA AAGVTSAKVR 
KDLSQLGSYG TRGVGYDVGV LLECISAELG LTEDRSVVLV GVGNLGHALA GYGGFHARGF
RIAALVDADP SRVGERVGEV VVRPVDELEA VIEDCQVTIG VISTPAAAAQ SVCDRLVAAG
VTSILNFAPT VLSVPEGVDV RKVDLALELQ ILSFHEARKR PSPGRAPGAG DVVVGDQPGS
GGFVDDEAGE VVRMTRRMVP PSPLAQPSPL AQPVARQSRA AQAAQAPEAA RMAQAPEVPM
PAATHGGEAE