Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6132 |
Symbol | |
ID | 5674453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7461455 |
End bp | 7462387 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641244984 |
Product | redox-sensing transcriptional repressor Rex |
Protein accession | YP_001510382 |
Protein GI | 158317874 |
COG category | [R] General function prediction only |
COG ID | [COG2344] AT-rich DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.249873 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCAAC CTCGGCGGGG TGCCGGGCGG GTACCGGGGC GGTCGCCGGT GCCCGAGGCG ACGGTGGCCA GGTTGCCCCT CTACCTCCGT GTGCTGACGG CGCTCGGCGA GCGCGGCGTG CACACGGTGT CCTCGGACAC GCTCGCCGCG GCCGCCGGCG TGACGTCGGC GAAGGTACGC AAGGACCTCT CCCAGCTCGG CTCGTACGGC ACGCGCGGAG TCGGGTACGA CGTGGGCGTG CTCCTTGAGT GCATATCGGC CGAGCTCGGC CTGACCGAAG ACCGCTCGGT CGTCCTCGTT GGCGTGGGTA ACCTCGGGCA TGCACTTGCC GGATACGGCG GCTTCCATGC CCGAGGGTTC CGCATCGCGG CATTGGTGGA CGCCGATCCG TCCAGGGTGG GTGAGCGGGT CGGTGAGGTC GTCGTTCGCC CGGTCGACGA GCTGGAGGCG GTCATCGAGG ACTGCCAGGT GACCATCGGC GTGATCTCCA CGCCGGCGGC CGCGGCGCAG AGCGTCTGCG ACCGCCTCGT GGCAGCGGGC GTGACCAGCA TCCTGAACTT CGCCCCCACG GTGCTTTCGG TGCCCGAGGG AGTGGATGTG CGTAAGGTCG ACCTTGCCCT GGAACTGCAG ATTCTCTCCT TTCACGAAGC GCGTAAACGT CCGTCGCCAG GCCGGGCCCC CGGCGCGGGG GACGTGGTGG TCGGCGATCA GCCGGGGTCG GGCGGATTCG TGGATGACGA GGCTGGTGAG GTCGTGCGGA TGACCCGTCG GATGGTGCCA CCGTCACCCT TGGCGCAGCC TTCACCGCTG GCGCAGCCGG TGGCGCGGCA GTCGCGGGCG GCACAGGCGG CGCAGGCACC GGAGGCGGCA CGGATGGCGC AGGCGCCGGA GGTGCCGATG CCGGCCGCCA CTCACGGGGG TGAGGCGGAG TGA
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Protein sequence | MGQPRRGAGR VPGRSPVPEA TVARLPLYLR VLTALGERGV HTVSSDTLAA AAGVTSAKVR KDLSQLGSYG TRGVGYDVGV LLECISAELG LTEDRSVVLV GVGNLGHALA GYGGFHARGF RIAALVDADP SRVGERVGEV VVRPVDELEA VIEDCQVTIG VISTPAAAAQ SVCDRLVAAG VTSILNFAPT VLSVPEGVDV RKVDLALELQ ILSFHEARKR PSPGRAPGAG DVVVGDQPGS GGFVDDEAGE VVRMTRRMVP PSPLAQPSPL AQPVARQSRA AQAAQAPEAA RMAQAPEVPM PAATHGGEAE
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