Gene Franean1_6098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6098 
Symbol 
ID5674419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7423208 
End bp7424314 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content75% 
IMG OID641244950 
Productadenosine deaminase 
Protein accessionYP_001510348 
Protein GI158317840 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1816] Adenosine deaminase 
TIGRFAM ID[TIGR01430] adenosine deaminase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0272536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTAGCG GGCCGAAGAT CGAGCTGCAC GTCCACCTCG AGGGGACGGT GCGGCCGGAG 
ATGCTGCTCG CGATGGCGCG CCGCAACAAC GAGGCGCTGC CGGCCCGCAC CGTCGAGGGC
GTAGCCGAGC TGTACCGCTT CCGCGACTTC GACCACTTCC TCAAGGTCTG GGTGCTCACG
ACGCAGGTCA TGCGCACGGC CGACGACTTC CGCGAGATCG TCGTCGACTA CGCGGGACGG
GCCGCCGCGC AGGGCGCCGT CTACCTCGAA GGCATCTTCT CGCCGTGGTT CCGGGTGAAC
CGGGGCGTGC CCTGGCAGGA GATCTTCACC GGCTACGCCG AGGGTGCCGT CGAGGCCCGC
GAGCGCTTCG GGGTCGAGGT ACGGCTGACC CCGGACATCG ACCGGGTGCT GCCACCCGAG
GTCGCGATGG ACGTCGTCGG CTGGGCAGCC CGGTTCACCG ACCGCGGTGT CGTCGGGATC
GGGCTCGGCG GGCCCGAGGT GGGCCATCCG CCGGAGCCGT ACGCGCCGGT CTTCGCCGCC
GCCGCGGACG CCGGCCTGCC CGCCGTCCCG CACGCGGGGG AGACGGCCGG CGCCGAGTCG
GTGCGCGGCG CGCTGCACGC GCTGGGGGCG AGGCGGATCC GGCACGGCGT GCGGGCCCTC
GAGGACCCCG AGCTCGTCGC CGAGCTGGTA GAGCGGGGCA TCGTGCTGGA CGTCTGCCCG
ACGTCGAACC TGCGGACGGG TGTCGTCACC GACCTGGCGG CGCACCCGCT GCCCGAGCTG
CTCGCGGCCG GGCTGCGCTG CTCGCTGGCC ACCGACGATC CGGCGATGTT CGGCACGGAT
CTCGAACGGG AGTACGCCGC CGCGGCGGGC CTCGGGGTGC GCCTCGCCCG GCTCTACGAG
GCCGGGGTTG CCGGCGCGCT GTGCGACGAC CGGACCCGGT CCCGGCTGGC GGCGCTCGGG
GCCGGCACGG ACTGGGACGC CGCCCAGGCC ACGGCGCTCG CCGCCGAGGC TGCTGGGTCC
GCGCTGGCCG GGTCCGCGCT GGCCGGGTCT GACGCGGCTG GGTCCGCGAC GGCGGGGTCC
GTGGCCATGA CGAACGCAGA GGGATGA
 
Protein sequence
MGSGPKIELH VHLEGTVRPE MLLAMARRNN EALPARTVEG VAELYRFRDF DHFLKVWVLT 
TQVMRTADDF REIVVDYAGR AAAQGAVYLE GIFSPWFRVN RGVPWQEIFT GYAEGAVEAR
ERFGVEVRLT PDIDRVLPPE VAMDVVGWAA RFTDRGVVGI GLGGPEVGHP PEPYAPVFAA
AADAGLPAVP HAGETAGAES VRGALHALGA RRIRHGVRAL EDPELVAELV ERGIVLDVCP
TSNLRTGVVT DLAAHPLPEL LAAGLRCSLA TDDPAMFGTD LEREYAAAAG LGVRLARLYE
AGVAGALCDD RTRSRLAALG AGTDWDAAQA TALAAEAAGS ALAGSALAGS DAAGSATAGS
VAMTNAEG