| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6078 |
|---|
| Symbol | |
|---|
| ID | 5674399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 7397810 |
|---|
| End bp | 7398871 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641244930 |
|---|
| Product | 2-oxoglutarate ferredoxin oxidoreductase subunit beta |
|---|
| Protein accession | YP_001510328 |
|---|
| Protein GI | 158317820 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.162959 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTCA CAACGAACGG CAGCGGGATT ACCAACCGAC TCCTGGACCT GGTACCCGCC
ACGCCGAGCC AGCTGAGCCG TAAGGACTTC ACCTCCGACC AGGAGGTCCG GTGGTGCCCG
GGATGCGGCG ACTACGCCAT CCTGGCCACC GTCCAGGGCT TCCTGCCCGA GCTGGGGATC
GCCCGGGAGA ACATCGCCTT CATCTCGGGC ATCGGGTGCT CCTCACGCTT CCCGTACTAC
CTGCAGACCT ACGGGATGCA CTCCATCCAC GGGCGGGCGC CGGCGATCGC GACGGGCCTG
GCGACGTCCC GCCCGGACCT GTCGGTCTGG GTGGTCACCG GTGACGGCGA CGCGCTCTCG
ATCGGCGGGA ACCACCTGCT GCACGCGATG CGCCGCAACG TGAACATCAA GATCCTGATG
TTCAACAACC GGATCTACGG GCTGACCAAG GGCCAGTACT CCCCGACGTC CGAGGTCGGC
AAGATCACCA AGTCGACGCC GTTCGGCTCG CTCGACCGCC CGTACAACCC GGCGTCGCTG
GCGCTGGGCG CGGAGGCGAC ATTCGTCGCC CGGTCGATCG ACTCGGACCG GGCCCACCTG
ACGTCGGTGC TGCGCGCGGC GGCGGAGCAC CCGGGCACCG CGTTCGTGGA GATCTTCCAG
AACTGCAACA TCTTCAACGA CGGTGCGTTC GAGGCGCTGA AGGACCGCGG CACCCGCGAC
GACGCCACGC TGAAGATGAT CGACGGCGAG CCGCTGGTCT TCGGCGCCGA GCGGGACAAG
GGCATCCGGC GCTCGGCGTC CGGCGGCCTC GAGGTCTGCG CGGCGACCGA CGAGGGCGTC
ATCGTGCACG ACGCGGCGAG CACGGACCCG AGCCAGGCGT TCGCGCTGTC CCGGCTGACC
GGGGATGACC ACGGCGTCAC CCCGATCGGC GTGTTCCGCA ACGTCGACAT CCCGACCTAC
GACGAGGCGC TCAACGCGCA GGTCGAGCAG ACCCGGGAGC GGCAGGGGAC GGGGGACCTC
ATGGCCCTCA TCTCCGGCGG CGAGACCTGG ACGATCAGCT GA
|
|---|
| Protein sequence | MTVTTNGSGI TNRLLDLVPA TPSQLSRKDF TSDQEVRWCP GCGDYAILAT VQGFLPELGI
ARENIAFISG IGCSSRFPYY LQTYGMHSIH GRAPAIATGL ATSRPDLSVW VVTGDGDALS
IGGNHLLHAM RRNVNIKILM FNNRIYGLTK GQYSPTSEVG KITKSTPFGS LDRPYNPASL
ALGAEATFVA RSIDSDRAHL TSVLRAAAEH PGTAFVEIFQ NCNIFNDGAF EALKDRGTRD
DATLKMIDGE PLVFGAERDK GIRRSASGGL EVCAATDEGV IVHDAASTDP SQAFALSRLT
GDDHGVTPIG VFRNVDIPTY DEALNAQVEQ TRERQGTGDL MALISGGETW TIS
|
|---|
| |