Gene Franean1_6074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6074 
Symbol 
ID5675779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7391825 
End bp7392313 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content65% 
IMG OID641244926 
Productputative nucleotide-binding protein 
Protein accessionYP_001510324 
Protein GI158317816 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.21358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGATC CGTCCTTCGA CATCGTCAGC AAGGTCGACA CCCAGGAGAT CGACAACGCG 
GTCAACCAGA CGGCGAAAGA GATCAAGACC CGCTTCGACT TCCGGGACAC CGGGGCCTCG
GCGGCGCTGT CCGGCGAGTC GATCCTCCTG CAGGCCAACA GCGAGGATCG GGTGAAGGCC
GTCCTGGACG TTCTGCAGGA GAAGTTCGTG AAGCGCGGCA TCTCGCTGAA GTCGCTCGAG
CACGGCGAGC CGCGGCAGTC GGGCAAGGAG TACAAGCTGA CGGTGACCGT CCAGCAGGGC
ATCGCGGACG AGAAGGCCAA GGCCATCGCC AAGAAGATCC GCGCGGACGG CCCGAAGGGC
GTGCAGGCGC AGATCCAGGG CGACCAGCTC CGGGTCACCG GCAAGAAGCG GGACGACCTG
CAGCGGGTCA TCCAGCTTCT CAAGGCCGAG GACTTCGACG TACCGCTGCA GTTCGTCAAC
TACCGGTGA
 
Protein sequence
MADPSFDIVS KVDTQEIDNA VNQTAKEIKT RFDFRDTGAS AALSGESILL QANSEDRVKA 
VLDVLQEKFV KRGISLKSLE HGEPRQSGKE YKLTVTVQQG IADEKAKAIA KKIRADGPKG
VQAQIQGDQL RVTGKKRDDL QRVIQLLKAE DFDVPLQFVN YR