Gene Franean1_6071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6071 
Symbol 
ID5674392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7389341 
End bp7389868 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content72% 
IMG OID641244922 
Productorotate phosphoribosyltransferase 
Protein accessionYP_001510321 
Protein GI158317813 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.574858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGACA TCGAAGCGCT GGCCGCCCGG GTGCGGGCGG CGTCTCACCT GACCGGGACG 
TTCCTCCTCC GGTCGGGCCG TACGAGCACC GAGTACTTCG ACAAGTACCT GTTCGAGGCC
GAGCCGGCGC TGCTCGCCGA CATCGTCGAG GCGATGGCGG CGCATCTCCC GCCGAACACC
GATCTCCTCG CCGGCCTGGA GCTGGGCGGC GTTCCGCTGG CCACGCTGCT GTCGGCACGC
ACCGGCCTGC CGGCCAGGTT CGTCCGCAAG AAGGCGAAGG AGTACGGAAC CCGGCGCATA
GCCGAGGGCG GCGAGGTCGA GGGTCGGCGG ATCGTCCTGG TCGAGGACGT CGTGACCAGC
GGCGGGGCCG TGCTCGACGC CACCCGGGTG CTGCGCGAGC AGGGCGCGGT CGTCGAGGAC
GTCCTGTGCG TCATCGATCG CCAGGAGGGT GGCCGGGAGC GGCTCGCGGA GATCGGCCTG
ACGCTGCTCC CCACTCTCAC CCGCGCCGAT CTCGACGCGG CTCGCTAG
 
Protein sequence
MADIEALAAR VRAASHLTGT FLLRSGRTST EYFDKYLFEA EPALLADIVE AMAAHLPPNT 
DLLAGLELGG VPLATLLSAR TGLPARFVRK KAKEYGTRRI AEGGEVEGRR IVLVEDVVTS
GGAVLDATRV LREQGAVVED VLCVIDRQEG GRERLAEIGL TLLPTLTRAD LDAAR