| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6054 |
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| Symbol | rpsL |
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| ID | 5674375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7366468 |
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| End bp | 7366842 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641244902 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_001510304 |
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| Protein GI | 158317796 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.234272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCCCACGA TCCAGCAGCT GGTCCGCAAG GGCCGGCAGG ACAAGGTCGA GAAGACCAAG
ACCCCGGCAC TCAAGGGGAG CCCGCAGCGT CGTGGCGTGT GCACCCGCGT CTACACGACC
ACCCCCAAGA AGCCGAACTC GGCGCTGCGC AAGGTGGCAC GCGTCCGGCT GAACAGCGGG
ATCGAGGTCA CGGCCTACAT CCCCGGGGTC GGTCACAACC TGCAGGAGCA CTCGATCGTC
CTGGTGCGTG GTGGCCGTGT GAAGGACCTC CCGGGCGTTC GCTACAAGAT TGTCCGGGGC
GCTCTCGACA CGCAGGGCGT CCGTAACCGG AAGCAGGCTC GCAGCCGCTA CGGCGCGAAG
AAGGAGAAGG GCTAA
|
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| Protein sequence | MPTIQQLVRK GRQDKVEKTK TPALKGSPQR RGVCTRVYTT TPKKPNSALR KVARVRLNSG
IEVTAYIPGV GHNLQEHSIV LVRGGRVKDL PGVRYKIVRG ALDTQGVRNR KQARSRYGAK
KEKG
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